Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02219 ATGGTTTCCCTTTCCACCACCCCTTTTCTTCCCTTCACTGCAAAAAATGCTTCTACTAGAATCCCTCCTCCCACATCATTCTCTTACAGCAAGCAACGTAGTAACAGGGATCCCAGGAAGGTTGTCTGCGCCTGCATCGCTCCTCCTCAAAACTTCAAGAGCCAGGACTCTTCCGCCATTCATTTCAATGGTTCGTCCAAATCAGAGCAATTGAGCACTGCGCGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGACGTGTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAAGCATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGCAAATCTACAGTTTTGAAGATTATTGCAGGACTTCTTGCTCCGGACAAGGGGGAAGTTTATATTCGAGGTAAAAAGAGAGTTGGTTTAGTAAGCGATGATGACATATCTGGTCTTCGGATTGGATTGGTTTTCCAAAGTGCTGCACTCTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGTCTGAGGATCAGATATCAGAGCTTGTCACGGAAACCTTGGCTGCAGTTGGATTGAAGGGAGTTGAGGATCGGTTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTGTGACACTACAAAGGAATCAATAGAGCCAGAGGTGCTCTTGTATGACGAACCAACTGCTGGACTTGATCCCATTGCATCTACTGTTGTTGAAGATCTGATTCGCTCTGTGCACATAAAAGGACAAGATGCACGTGGAAAACCTGGGAATATTTCATCTTATGTGGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAGGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACAACTTCAACTAATCCAATTGTCCAGCAGGTCACTCGGTCTTGTGCAGGATTGTCGTACCGTAGGGGGTGTTCATTAGACCCGGgaaccaacctgatccaattatattggattgggtttttcagtgttcaagtcgaaactgacccgatccaattaaacagTTTGCATCTGGGAGCCTTGATGGTCCTATCAGATATTAGAACAGTACTGCAATTTTAA 1188 0.4057 MVSLSTTPFLPFTAKNASTRIPPPTSFSYSKQRSNRDPRKVVCACIAPPQNFKSQDSSAIHFNGSSKSEQLSTARDHEDDSDVLIECRDVYKSFGEKKILNGVSFKIKHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELVTETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGQDARGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQVTRSCAGLSYRRGCSLDPGTNLIQLYWIGFFSVQVETDPIQLNSLHLGALMVLSDIRTVLQF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02219 395 Pfam ABC transporter 100 255 IPR003439 GO:0005524
Gma18g02219 395 MobiDBLite consensus disorder prediction 15 34 - -
Gma18g02219 395 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 31 337 - -
Gma18g02219 395 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 31 337 - -
Gma18g02219 395 CDD ABC_Org_Solvent_Resistant 85 333 - -
Gma18g02219 395 SMART AAA_5 109 313 IPR003593 -
Gma18g02219 395 Gene3D - 71 340 IPR027417 -
Gma18g02219 395 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 336 IPR003439 GO:0005524
Gma18g02219 395 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524
Gma18g02219 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 326 IPR027417 -
Gma18g02219 395 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02219 Gma-Chr18 55972260 55978016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02219 84 336 Calmodulin-binding Proteins AT2G36910 27.715 1.29e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02219 - - gmx:100783283 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02219 18 55972260 55978016 Gma09g02305 09 48508128 48512413 GST