Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02200 ATGGAAAGCCAAGACCCACCAAACCCACCACCCCAAAACAACCCCTTCCTCTTCACGCCAAATTCGATGTTGCAAAGCCCTAATTTGGACCCTCAAGAGCAATTAGGGCTATGTGACATTGACTGGGGTAACCTTTTCTCTGCTCAAAACAGCTTCTTGCTTAATGGGGATGCCAACGATGCAATTGAATGTGCTTCTTCTTCTTCTTTTGTGGCTCAAAATAAGGTAGCTTGTGAAGAGGAAAAGGGAAACAAGGAGAAAAGGAAAGGTGGGAGGATGAAGAAAACAACACGAGTGCCAAGGTTTGCGTTTCAAACGAGAAGTGCAGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGTCAGAAAGCTGTGAAGAATAACACATATCCAAGAAGCTACTACCGCTGCACGCATCACACGTGCAATGTGAAGAAACAAGTGCAAAGGCTATCCAAAGACACAAGCATTGTGGTGACGACTTACGAGGGAATTCACAACCACCCGTGCGAGAAGTTGATGGAAACTCTAACCCCTCTCCTCAAGCAAATACAGTTTCTTGCCAGCTTGTAA 579 0.4491 MESQDPPNPPPQNNPFLFTPNSMLQSPNLDPQEQLGLCDIDWGNLFSAQNSFLLNGDANDAIECASSSSFVAQNKVACEEEKGNKEKRKGGRMKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNNTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02200 192 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 25 188 - -
Gma18g02200 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 188 IPR044810 GO:0003700
Gma18g02200 192 MobiDBLite consensus disorder prediction 1 30 - -
Gma18g02200 192 Pfam WRKY DNA -binding domain 114 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g02200 192 Gene3D WRKY domain 98 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g02200 192 ProSiteProfiles WRKY domain profile. 108 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g02200 192 MobiDBLite consensus disorder prediction 1 16 - -
Gma18g02200 192 SMART WRKY_cls 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g02200 192 SUPERFAMILY WRKY DNA-binding domain 106 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02200 Gma-Chr18 55787616 55789532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02200 86 192 WRKY Transcription Factor Family AT5G41570 73.832 2.04e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma18g02200 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02200 - - gmx:100127398 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02200 18 55787616 55789532 Gma18g02200 18 55787616 55789532 ECH
Gma18g02200 18 55787616 55789532 Gma09g02329 09 48670799 48672406 GST
Gma18g02200 18 55787616 55789532 Gma16g00284 16 2971894 2974712 PCT
Gma16g00284 16 2971894 2974712 Gma18g02200 18 55787616 55789532 PCT