Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02192 ATGGTGTCCCTCAACCTCAACCCAAACCCACCTCAAACTTTTCACTTCTTCGACCCCTTCAACATGGAGGATCAGAATAAGAAGGTCCGAAAACCTTACACCATTACCAAGTCCAGAGAGAACTGGACCGACCAGGAGCATGACAAGTTTCTCGAAGCTCTTCACTTattcgaccgtgactggaagaagattgaagcatttgtaggttcaaaaacagttatccagataaggagtcatgcacagaagtatttcatgaaagttcagaagaatggcacaagtgaacatgtacctccccctcgtccaaagagaaaagctgctcatccctacccacaaaaggcatctaaaaatgCTCTTACTATATCCCAAGTTGCGCGGCCATTGCAATCTTCATCTGCTTTATCTGAATCATCACACATCTATAGGCCAGATTCATCATCTGTGGTTAGAACTCCAGTTAGCAGTGTGCCATTGCCATCTTGGGTTTATAATGTTACACCACCAGTCAGTCTTCCCCGAGTGACTAAAGATGATATGGTGATGATGAGTCAACAAATCAATCCTTTCAGCAGTAGTAATGAGAGCACTCCTAGGGGTTGGCCAATTAGCAAACAGACAGATCAGGGTGACCAAGGCAAGCCAACTATAGTAATGCCAGATTTTGCACAAGTCTATAGCTTCATTGGCACTGTATTTGATCCAAATGCAATTAATCATCTACAGAGGCTGAAACAGATGGACCCAATAAATGTAAAAACTGTATTGCTATTGATGAGAAACCTCTCCACCAATTTAAGGAGTCCTGAATTTGAGAATGAAAGAAGGATGCTGTCATTGTACTATGCTAACATGGAGAAGGAAAAATCCAGTAGTCATCGAAGCCAACCCCTCACTGACAGATCAGAGAGTGTTGTCTTATCTGCTTAA 924 0.3431 MVSLNLNPNPPQTFHFFDPFNMEDQNKKVRKPYTITKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVIQIRSHAQKYFMKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNALTISQVARPLQSSSALSESSHIYRPDSSSVVRTPVSSVPLPSWVYNVTPPVSLPRVTKDDMVMMSQQINPFSSSNESTPRGWPISKQTDQGDQGKPTIVMPDFAQVYSFIGTVFDPNAINHLQRLKQMDPINVKTVLLLMRNLSTNLRSPEFENERRMLSLYYANMEKEKSSSHRSQPLTDRSESVVLSA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02192 307 SMART sant 38 86 IPR001005 -
Gma18g02192 307 CDD SANT 41 84 IPR001005 -
Gma18g02192 307 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Gma18g02192 307 MobiDBLite consensus disorder prediction 187 211 - -
Gma18g02192 307 MobiDBLite consensus disorder prediction 286 307 - -
Gma18g02192 307 PANTHER SWI/SNF COMPLEX-RELATED 10 300 - -
Gma18g02192 307 PANTHER MYB TRANSCRIPTION FACTOR 10 300 - -
Gma18g02192 307 Pfam Myb-like DNA-binding domain 39 84 IPR001005 -
Gma18g02192 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 37 86 IPR006447 GO:0003677
Gma18g02192 307 Gene3D - 41 89 - -
Gma18g02192 307 ProSiteProfiles SANT domain profile. 37 90 IPR017884 -
Gma18g02192 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 88 IPR017930 -
Gma18g02192 307 MobiDBLite consensus disorder prediction 89 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02192 Gma-Chr18 55667678 55673198 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma18g02192 Myb_DNA-binding 4.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02192 - - gmx:100791774 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02192 18 55667678 55673198 Gma18g02192 18 55667678 55673198 ECH
Gma18g02192 18 55667678 55673198 Gma16g00293 16 3103871 3110116 ECH
Gma18g02192 18 55667678 55673198 Gma09g02338 09 48761540 48765433 GST
Gma18g02192 18 55667678 55673198 Gma07g00606 07 6225473 6230840 PCT
Gma18g02192 18 55667678 55673198 Gma16g00293 16 3103871 3110116 PCT
Gma07g00606 07 6225473 6230840 Gma18g02192 18 55667678 55673198 PCT
Gma16g00293 16 3103871 3110116 Gma18g02192 18 55667678 55673198 PCT