Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma18g02160 | ATGGATTTCATAGGTCCAGTGTTGGACCTCATAATTCGCATGTGGGACTCTTTGCCTGCATCCTCGAATGAAATACCTCTAGAGGCCACAGTAGGTCTAGAATCAACCTTTGATGAACTTAGTGGATGTTTTGATGACAATCATGTTGGAGTTATTGGCTTGTATGGGATAGGGGGTGTAGGAAAGACAACCCAGCTCAAAAAGTTCAATAATGAGTTCCTTCCCACAAAATTCTATGATGTTAGCATTTGGGCTGTGGTGTCTAGAAAAGCACCTGAATTTGGTGATGATGTCTACGAAGCACGTAATCAAGGAGAAGAAATCATAGCAAGCTTGAAGCTTACTTGTTTGTTGGAGGACAGAGAGAGAGAAAACAGGATTAAGATGCATGATATGATCAGAGACATGGCTTTGTGGCTAGCATGTGATCATGGATCCAACACCAGGTTTTTGGTGAAAGATGATGCATGCAGCAGAAAATCAGATTGCTCAAATCTCTCGACTATGATTGTCAGAAATTCTGAGCTAACAGACCTTTCTGATGAGATCTTTCTGACTGCAAACACTCTTGGAGTGTTAGACTTGTCAGGGAATAAAAGAGTAAAAGAATTACATGCGATTATTGGGGAGTTAGTTAGCTTGCAGCATTTGGATCTATCAGGTACTGGTATACAAGAATTGCCAAGGGAGCTCCAGAACTTGAAAAAGTTGAGCACCACGAGAGAGAAAAGCACAATAGATTTGAGCCAATACCCAACAGAGCTCGTTAGAAACTTCTCAATCATTGCTTACGTTGATCATGGCAAGTTCACACTCGCTGATCGGCTTCTAGAACTCACTGGAACCATTAAGAAAGGCCATGGCCAACCCCAGTATCTTGATAAACTGCAGGTGGAGAGAGAAAGAGGAATCACAGTTAAAGCCCAGACAGCAACAATGTTTTATAAGCACAGTGTAAATGGCAATGATTGCAATGATGGAAAGGAAGGAAATGAGTCACCTAAGTTTTTGCTGAATCTTATTGACACTCCTGGACATGTTGATTTTAGTTATGAAGTGTCGAGGTCACTGGCAGCTTGTCAGGGTGTGCTTTTGGTTGTTGATGCTGCTCAGGGAGTCCAAGCACAAACTGTTGCTAACTTTTACCTTGCCTTTGAGTCTAACCTAACAATTGTGCCTGTTATAAAGCCCGAGATTGACCATGCACAAGATTGA | 1215 | 0.4189 | MDFIGPVLDLIIRMWDSLPASSNEIPLEATVGLESTFDELSGCFDDNHVGVIGLYGIGGVGKTTQLKKFNNEFLPTKFYDVSIWAVVSRKAPEFGDDVYEARNQGEEIIASLKLTCLLEDRERENRIKMHDMIRDMALWLACDHGSNTRFLVKDDACSRKSDCSNLSTMIVRNSELTDLSDEIFLTANTLGVLDLSGNKRVKELHAIIGELVSLQHLDLSGTGIQELPRELQNLKKLSTTREKSTIDLSQYPTELVRNFSIIAYVDHGKFTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSVNGNDCNDGKEGNESPKFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVIKPEIDHAQD | 404 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma18g02160 | 404 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 250 | 395 | IPR027417 | - | |
Gma18g02160 | 404 | Gene3D | - | 246 | 396 | IPR027417 | - | |
Gma18g02160 | 404 | ProSiteProfiles | Leucine-rich repeat profile. | 213 | 235 | IPR001611 | GO:0005515 | |
Gma18g02160 | 404 | SUPERFAMILY | L domain-like | 118 | 239 | - | - | |
Gma18g02160 | 404 | PANTHER | TRANSLATION FACTOR GUF1, MITOCHONDRIAL | 242 | 396 | - | - | |
Gma18g02160 | 404 | Pfam | Elongation factor Tu GTP binding domain | 256 | 395 | IPR000795 | GO:0003924|GO:0005525 | |
Gma18g02160 | 404 | Pfam | Leucine rich repeat | 164 | 223 | IPR001611 | GO:0005515 | |
Gma18g02160 | 404 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 254 | 404 | IPR000795 | GO:0003924|GO:0005525 | |
Gma18g02160 | 404 | Pfam | NB-ARC domain | 44 | 90 | IPR002182 | GO:0043531 | |
Gma18g02160 | 404 | PRINTS | GTP-binding elongation factor signature | 301 | 309 | IPR000795 | GO:0003924|GO:0005525 | |
Gma18g02160 | 404 | PRINTS | GTP-binding elongation factor signature | 339 | 349 | IPR000795 | GO:0003924|GO:0005525 | |
Gma18g02160 | 404 | PRINTS | GTP-binding elongation factor signature | 258 | 271 | IPR000795 | GO:0003924|GO:0005525 | |
Gma18g02160 | 404 | PRINTS | GTP-binding elongation factor signature | 355 | 366 | IPR000795 | GO:0003924|GO:0005525 | |
Gma18g02160 | 404 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 25 | 94 | IPR027417 | - | |
Gma18g02160 | 404 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 294 | 309 | IPR031157 | - | |
Gma18g02160 | 404 | Gene3D | - | 17 | 245 | IPR027417 | - | |
Gma18g02160 | 404 | PANTHER | TRANSLATION FACTOR GUF1-RELATED | 242 | 396 | IPR006297 | GO:0005525 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma18g02160 | Gma-Chr18 | 55306796 | 55309535 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma18g02160 | 256 | 377 | Eukaryotic Initiation Factors Gene Family | AT1G56070 | 43.548 | 6.16e-21 | 93.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma18g02160 | K21594 | - | gmx:100781092 | 291.197 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma18g02160 | 18 | 55306796 | 55309535 | Gma09g02363 | 09 | 49004071 | 49006776 | GST |