Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02160 ATGGATTTCATAGGTCCAGTGTTGGACCTCATAATTCGCATGTGGGACTCTTTGCCTGCATCCTCGAATGAAATACCTCTAGAGGCCACAGTAGGTCTAGAATCAACCTTTGATGAACTTAGTGGATGTTTTGATGACAATCATGTTGGAGTTATTGGCTTGTATGGGATAGGGGGTGTAGGAAAGACAACCCAGCTCAAAAAGTTCAATAATGAGTTCCTTCCCACAAAATTCTATGATGTTAGCATTTGGGCTGTGGTGTCTAGAAAAGCACCTGAATTTGGTGATGATGTCTACGAAGCACGTAATCAAGGAGAAGAAATCATAGCAAGCTTGAAGCTTACTTGTTTGTTGGAGGACAGAGAGAGAGAAAACAGGATTAAGATGCATGATATGATCAGAGACATGGCTTTGTGGCTAGCATGTGATCATGGATCCAACACCAGGTTTTTGGTGAAAGATGATGCATGCAGCAGAAAATCAGATTGCTCAAATCTCTCGACTATGATTGTCAGAAATTCTGAGCTAACAGACCTTTCTGATGAGATCTTTCTGACTGCAAACACTCTTGGAGTGTTAGACTTGTCAGGGAATAAAAGAGTAAAAGAATTACATGCGATTATTGGGGAGTTAGTTAGCTTGCAGCATTTGGATCTATCAGGTACTGGTATACAAGAATTGCCAAGGGAGCTCCAGAACTTGAAAAAGTTGAGCACCACGAGAGAGAAAAGCACAATAGATTTGAGCCAATACCCAACAGAGCTCGTTAGAAACTTCTCAATCATTGCTTACGTTGATCATGGCAAGTTCACACTCGCTGATCGGCTTCTAGAACTCACTGGAACCATTAAGAAAGGCCATGGCCAACCCCAGTATCTTGATAAACTGCAGGTGGAGAGAGAAAGAGGAATCACAGTTAAAGCCCAGACAGCAACAATGTTTTATAAGCACAGTGTAAATGGCAATGATTGCAATGATGGAAAGGAAGGAAATGAGTCACCTAAGTTTTTGCTGAATCTTATTGACACTCCTGGACATGTTGATTTTAGTTATGAAGTGTCGAGGTCACTGGCAGCTTGTCAGGGTGTGCTTTTGGTTGTTGATGCTGCTCAGGGAGTCCAAGCACAAACTGTTGCTAACTTTTACCTTGCCTTTGAGTCTAACCTAACAATTGTGCCTGTTATAAAGCCCGAGATTGACCATGCACAAGATTGA 1215 0.4189 MDFIGPVLDLIIRMWDSLPASSNEIPLEATVGLESTFDELSGCFDDNHVGVIGLYGIGGVGKTTQLKKFNNEFLPTKFYDVSIWAVVSRKAPEFGDDVYEARNQGEEIIASLKLTCLLEDRERENRIKMHDMIRDMALWLACDHGSNTRFLVKDDACSRKSDCSNLSTMIVRNSELTDLSDEIFLTANTLGVLDLSGNKRVKELHAIIGELVSLQHLDLSGTGIQELPRELQNLKKLSTTREKSTIDLSQYPTELVRNFSIIAYVDHGKFTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSVNGNDCNDGKEGNESPKFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVIKPEIDHAQD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02160 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 250 395 IPR027417 -
Gma18g02160 404 Gene3D - 246 396 IPR027417 -
Gma18g02160 404 ProSiteProfiles Leucine-rich repeat profile. 213 235 IPR001611 GO:0005515
Gma18g02160 404 SUPERFAMILY L domain-like 118 239 - -
Gma18g02160 404 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 242 396 - -
Gma18g02160 404 Pfam Elongation factor Tu GTP binding domain 256 395 IPR000795 GO:0003924|GO:0005525
Gma18g02160 404 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Gma18g02160 404 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 254 404 IPR000795 GO:0003924|GO:0005525
Gma18g02160 404 Pfam NB-ARC domain 44 90 IPR002182 GO:0043531
Gma18g02160 404 PRINTS GTP-binding elongation factor signature 301 309 IPR000795 GO:0003924|GO:0005525
Gma18g02160 404 PRINTS GTP-binding elongation factor signature 339 349 IPR000795 GO:0003924|GO:0005525
Gma18g02160 404 PRINTS GTP-binding elongation factor signature 258 271 IPR000795 GO:0003924|GO:0005525
Gma18g02160 404 PRINTS GTP-binding elongation factor signature 355 366 IPR000795 GO:0003924|GO:0005525
Gma18g02160 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 94 IPR027417 -
Gma18g02160 404 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 294 309 IPR031157 -
Gma18g02160 404 Gene3D - 17 245 IPR027417 -
Gma18g02160 404 PANTHER TRANSLATION FACTOR GUF1-RELATED 242 396 IPR006297 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02160 Gma-Chr18 55306796 55309535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02160 256 377 Eukaryotic Initiation Factors Gene Family AT1G56070 43.548 6.16e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02160 K21594 - gmx:100781092 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02160 18 55306796 55309535 Gma09g02363 09 49004071 49006776 GST