Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02145 ATGGCAACTGATATGCAGAGGCTTGTTGGAACGAGTGAGGATGATGAAGAAATGGGAATGGATGTGAAAGATGAGGATGATGACGATGATGATTATGAGGAAAATGGAGGTGAGCAGGGAAATGCTTCAGTATCAGGGATGGTAGAGATTGATGGTGGGAATGGGATAGGAACTGCCACTGATGACAACAGGTTTCAGCAGCACCAGCAGTTTCAAGAGCAAGTAGGCACCCCAGGTGGAGGTACTCGAAGATCTAGGCCGCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGCCGGAGGGCCATCACTGCAAGGATCTTGGCGGGGCTTCGCAGGCATGGCAACTACAATCTAAGAGTTAGGGCTGACATAAATGATGTCATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGTACTACTTTTCCCTCAAGATCTCAGGTTCAAAAGCCTGCTGGTGGTAATTCTACAATTGTCACTTCATCATCTTCCCATGCGGCTTCACAACAGACTCCATCTGCTTCTCTCAGGGGAGTTGCTTCTGGCTATAGGAGCCCTTTAGAGTATAATGCATGTCAAACAAAAAGTGTTTTTATGCCAACTCCGTCTCCTTATGGTCTATCCTCAAGTTCCCGGTCTCAAACATCTATGGTGGGGGATGGAGAAGCACAAAGAGACAATCGTCCTCTGATTGGTGGTTCAATGGATAATGCTGATGATAAGCAGATTGCTGACTTACCCCCCAGATTACCAGAGCGTGATTTGGCTGGTACCCCATATGTTCCAGTTTATGTGATGCTACCGTTAGGGGTGATCAATATTAAATGTGAGCTAGTTGATCCGGATGGTCTACTAAAGCAGCTGAAGGTGTTGAAATCAGTACATGTTGATGGTGTTATGGTAGACTGTTGGTGGGGAATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGAGAGCTTAAGCTTAAGCTGCAGGTTGTGATGTCATTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAGATTGGTAGGAGCAATCCTGACATTTTTTTCACTGATAGAGAGGGAAGGCACAACCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGGGTTTTAAGAGGCCGTACTGCTTTGGAGGTTTACTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATGAATATTTTGAGGATGGGTTAATCTCTATGATTGAAGTTGGACTGGGTCCATGTGGAGAGCTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGCAGCAGAAGTAAGGGGTCACGCTATTTGGGCTAGAGGGCCAGATAATGCTGGTACCTATAATTCTCAGCCACATGAAACAGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTGATTGATCATGGAAACCGGGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGATCTTGCATTGCTGCAAAGTTATCGGGTATTTACTGGTGGTACAAGACTGCAAGTCATGCTGCCGAATTAACCGCTGGGTATTATAACCCATGCAATCGTGATGGTTATGCTGCAATTATGACAATGTTAAAGACAAATGGAATCAACTTAAACATTCCTTGTGTTGACTTGCACACATTGAACCAACATGAGGGCTTTCCAGAGACCTTTGCAGATCCCGAGGGACTAGTCTGGCAAGTGTTGAATGCCGGGTGGGAAGTTGACCTACCAGTTACCAGTCAGAATGGATTTCCTTGCCTAAACAGAGTTGGCTATAACAAGGTTTTGGATAATGCCAAGCCCATGAATGATCCAGATGGAAGGCACTTTTCATCTTTTACTTACCTGAGGCTTAGTTCACTTCTCATGGAACGACAAAACTTCATAGAGTTTGAAAGATTTGTCAAGAGAATGCATGGGGAAGCTGTTCTTGATCTTCAGTTTATGAACATACTTGTTGAAGCAGTATCCAGCCAACCTTCCAAACCAGAATTTATATTATTCCAACAACCTCGGGTCCTCACTTTGACTCTGTCTGTAATGCTACAATACTACATAGGATCCGTTCCTTTCGTTCTTCATCAGTTAGTACTTAGTTATGTGTTTGAGTTCCTTGGGAACGTTCCTCTACTTCAGAGGCTTCCTGGCTCGTCTGTGCAGAAGATATCCGAACTTGTGATTCTCAAACACTATGAGCCAGGAGAGTATGTTGTTCGTGAGGGAGAACGTGGGGATGGTCTTTACTTCATCTGGGGGGGAGAGGCTGAGGTTGTTGGCTCTGTTAGTGCCGATGAAGATAATCATCCAGAGTTTCACTTGAAAAGATATGACTATTTTGGTTTTGGTTTACCAAATGATGTTCACCATGCTGATGTTGTAGCTTTGACAAAGCTATCATGCATGGTGTTGCCCCATGAGCACTCAACATTGCTGCAGCCAAAGTCTATATGGAGTGCAGAAATATCTCCTGATACATGCTCACCTGTGGAGCATATATTGCATTTGGAACCTATAGAGGTAGATATCTTCCGAGGAATCACTCCTCCAGATGCTCCAAAATTTGGGAAGGTATTTGGTGGACAAATAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGCCTATTTTCTTCTTGTGGGAGATTTTAACATACCCATTATATATCAAGTTTATCGTCTCCGTGATGGGAAGAGTTTTGCTACTAGGAAAGTGGATGCGATTCAAAAGGGACATATCATATTCACTTTGCTGGCTTCATTTCAGAAGGAAGAAGTAGGGTTTCACCACCAGGCAGTGTCCATCCCATTGGTCCCTGCACCAGATGAGCTTTTATCGCTGGAAGAACTACGGGAGCAACGTCTAACGGACCCTCGTCTTCCAAGAACTTACCGAATCAAGGTTGCTTCAACTGAATTCATTCCTTGGCCTATTGAGATACGGTTCTGTGAACCTAAAACTTCAACAAATCAGACCAAATCTCCCCCTAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTAGTTGCATATGCTTCAGATCTAATCTTTCTTCAAGTGAGTTTGAACCCCAACCGTAAGAAGGGCATGAAGGCACGTGGTGTGAGTCTGGACCACTCCATGTGGTTTCATAGGCATTTAAGAGCTGATGACTGGGTGCTATTTGTGATCTTTAGTCCTACTTCTTCTAATGCCCGGGGCTATGTCACTGGCCAAATGCTCAATCAGAAGGGAGAGCTTCTTGTGTCAGTGGTTCAAGAAGGTCTAATGAGGGAAGTTATTTCTGCAAATTCAGCCATCAAATCTAATCTTTGA 3543 0.4389 MATDMQRLVGTSEDDEEMGMDVKDEDDDDDDYEENGGEQGNASVSGMVEIDGGNGIGTATDDNRFQQHQQFQEQVGTPGGGTRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQVQKPAGGNSTIVTSSSSHAASQQTPSASLRGVASGYRSPLEYNACQTKSVFMPTPSPYGLSSSSRSQTSMVGDGEAQRDNRPLIGGSMDNADDKQIADLPPRLPERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLKVLKSVHVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTALEVYFDFMRSFRVEFDEYFEDGLISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEVRGHAIWARGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLSWYSQVLIDHGNRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIMTMLKTNGINLNIPCVDLHTLNQHEGFPETFADPEGLVWQVLNAGWEVDLPVTSQNGFPCLNRVGYNKVLDNAKPMNDPDGRHFSSFTYLRLSSLLMERQNFIEFERFVKRMHGEAVLDLQFMNILVEAVSSQPSKPEFILFQQPRVLTLTLSVMLQYYIGSVPFVLHQLVLSYVFEFLGNVPLLQRLPGSSVQKISELVILKHYEPGEYVVREGERGDGLYFIWGGEAEVVGSVSADEDNHPEFHLKRYDYFGFGLPNDVHHADVVALTKLSCMVLPHEHSTLLQPKSIWSAEISPDTCSPVEHILHLEPIEVDIFRGITPPDAPKFGKVFGGQIVGQALAAASKSVDCLKVVHSLHAYFLLVGDFNIPIIYQVYRLRDGKSFATRKVDAIQKGHIIFTLLASFQKEEVGFHHQAVSIPLVPAPDELLSLEELREQRLTDPRLPRTYRIKVASTEFIPWPIEIRFCEPKTSTNQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPNRKKGMKARGVSLDHSMWFHRHLRADDWVLFVIFSPTSSNARGYVTGQMLNQKGELLVSVVQEGLMREVISANSAIKSNL 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02145 1180 TIGRFAM tesB: acyl-CoA thioesterase II 889 1167 IPR003703 GO:0006637|GO:0047617
Gma18g02145 1180 Gene3D Jelly Rolls 755 875 IPR014710 -
Gma18g02145 1180 MobiDBLite consensus disorder prediction 208 245 - -
Gma18g02145 1180 CDD Thioesterase_II_repeat1 1064 1166 - -
Gma18g02145 1180 SUPERFAMILY cAMP-binding domain-like 757 863 IPR018490 -
Gma18g02145 1180 PRINTS Plant beta-amylase signature 685 699 IPR001371 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Plant beta-amylase signature 427 436 IPR001371 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Plant beta-amylase signature 670 684 IPR001371 GO:0000272|GO:0016161
Gma18g02145 1180 Pfam Cyclic nucleotide-binding domain 785 862 IPR000595 -
Gma18g02145 1180 MobiDBLite consensus disorder prediction 208 227 - -
Gma18g02145 1180 Gene3D Glycosidases 258 726 - -
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 322 340 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 344 365 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 437 459 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 579 602 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 510 529 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 301 315 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 561 572 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 619 641 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 544 560 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 999 1167 IPR029069 -
Gma18g02145 1180 MobiDBLite consensus disorder prediction 17 36 - -
Gma18g02145 1180 MobiDBLite consensus disorder prediction 146 183 - -
Gma18g02145 1180 MobiDBLite consensus disorder prediction 59 79 - -
Gma18g02145 1180 SMART cnmp_10 766 883 IPR000595 -
Gma18g02145 1180 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 793 809 IPR018488 -
Gma18g02145 1180 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 882 991 IPR029069 -
Gma18g02145 1180 PANTHER BETA-AMYLASE 79 703 - -
Gma18g02145 1180 MobiDBLite consensus disorder prediction 84 98 - -
Gma18g02145 1180 CDD CAP_ED 766 863 IPR000595 -
Gma18g02145 1180 Pfam Glycosyl hydrolase family 14 270 689 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 Pfam Thioesterase-like superfamily 911 1166 - -
Gma18g02145 1180 SUPERFAMILY (Trans)glycosidases 263 701 IPR017853 -
Gma18g02145 1180 CDD Thioesterase_II_repeat2 897 989 - -
Gma18g02145 1180 Gene3D - 880 1169 IPR042171 -
Gma18g02145 1180 ProSiteProfiles cAMP/cGMP binding motif profile. 766 836 IPR000595 -
Gma18g02145 1180 PANTHER - 79 703 IPR001554 GO:0000272|GO:0016161
Gma18g02145 1180 Pfam BES1/BZR1 plant transcription factor, N-terminal 81 224 IPR008540 -
Gma18g02145 1180 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02145 Gma-Chr18 55088196 55101535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02145 1 701 Glycoside Hydrolase AT2G45880 65.297 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gma18g02145 Glyco_hydro_14 4.3e-101 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02145 K01177 - gmx:100805560 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02145 18 55088196 55101535 Gma18g02145 18 55088196 55101535 ECH
Gma18g02145 18 55088196 55101535 Gma09g02378 09 49143307 49154429 GST