Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02104 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGGTTCCAAACGAGGGTTTGGCATCTTTTCTGATAAAGATGTTTGTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGACGACAGGTTATTAATGATGCTGTTACTGACTGTGGAGCGTTTGCGTAAAAATTCTCTATGGAAGCCGTACCTTGATATGCTACCAACCACTTTTGGAAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAGCTAAGAGGAACAACATTATATCGTGCAACTGAATTGCAGAAGAAAAGCCTGCTTTCTTTGTATGAATCTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGAAATTCAGAGATGTATTCTTGCCTTCTTGCTAGGGCAAATTCAGTATTTTGGAGTCGTGCTTTGAACATTCCAATGCCTCATTCTTATGTATTTCCAGAAATGCAAGATGCTCAAGACATTTGCGATCCAGAAGCTGATGAAAAAAGAAGCCAGATTGAGCAATCTGACAATCTGACCAAAGAAGGGACATGTAACCCAATGACAGGAGACACTGTTTGGGTTGAAGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGTTTAGCATCAGGAGTTCCTTTCTCCATGTATCTTATCTCTGCTGCTCAAAGTCCCTTGCAGATTGATCAAGAAATCTACATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTGTATCTGTATGGTTTTGTTATTGATGATAACACTGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTAATACAATTTCCTTCTCTGAGTCCAAAAACCAGCTTCTTGAAGTGCAGaaggctgaattgagatgtcttttacccaaaacttcactggataatggattttttccgttaaacacccaaaacggtgaagaaaataacaagtccaaagctgaccaagtttgcaactatagttggagtggtcagcgcaagatgccatcttatgtaaacaagctggtgtttcctgagaaatttatgactactttgagaaccatagccatgcaagaagatgagcttttcaaggtttcctcaatgctggaagagcttgctggacctgaaagggagagacaactatcagatacagatgtccaatcagcagtgtgggaggtctgtggtgattctggagctttacaattgcttgtcgatcttcttcgtgtgaaGATGATGGATCTTGAAGAGAGTTCTGGAACAGAGGAAAATGACCTTGATTTGCTCAAGAAAGCCCTTATTATTGATAGCCATGAAGATAGCAAACAATGCCTGAGCAATTTAAGCCCAAAGGAAAATGACTCAGAGGAGCCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTATATAGGCGTGGCCAGAAGCAGCTAACTCGTTTATTCTTGAAAGAAGCAGAACATGCTTTGCAGTTATCTCTGAATGAAGAAGAGTTCACTTTTCCTTGTTAA 1674 0.3184 MASPEEAKLETFMQWLQANGVELRGCKIKWCGSKRGFGIFSDKDVCDGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLMMLLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYESKVKDIVKKLLTLDGNSEMYSCLLARANSVFWSRALNIPMPHSYVFPEMQDAQDICDPEADEKRSQIEQSDNLTKEGTCNPMTGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGLASGVPFSMYLISAAQSPLQIDQEIYISYGNKGNEELLYLYGFVIDDNTDDYLMVHYPAEAINTISFSESKNQLLEVQKAELRCLLPKTSLDNGFFPLNTQNGEENNKSKADQVCNYSWSGQRKMPSYVNKLVFPEKFMTTLRTIAMQEDELFKVSSMLEELAGPERERQLSDTDVQSAVWEVCGDSGALQLLVDLLRVKMMDLEESSGTEENDLDLLKKALIIDSHEDSKQCLSNLSPKENDSEEPKLMTRNKWSAIVYRRGQKQLTRLFLKEAEHALQLSLNEEEFTFPC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02104 557 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 551 - -
Gma18g02104 557 SUPERFAMILY SET domain 8 313 IPR046341 -
Gma18g02104 557 Pfam SET domain 36 295 IPR001214 GO:0005515
Gma18g02104 557 CDD SET_LSMT 36 309 - -
Gma18g02104 557 Gene3D set domain protein methyltransferase, domain 1 5 309 - -
Gma18g02104 557 PANTHER SET DOMAIN-CONTAINING PROTEIN 4 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02104 Gma-Chr18 54764982 54771856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02104 8 320 NAC Transcription Factor Family AT3G56570 25.000 2.49e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma18g02104 SET 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02104 - - gmx:100777394 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02104 18 54764982 54771856 Gma09g02413 09 49442469 49449762 GST