Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02096 ATGGTGGAAGATGGTGATGAGGTTGATGCACGTTCCACAGAAGACTGGTTGTTGCATGCACAGGAACTTGTTCCTGTTGTCCTTGATAAGGCCAGAGAGGTCAAGGGATTTGCTGGTAGATGGAAGATGATTGTTGCGAAATTGGAACAGATCCCTTCGCAGTTATCGGATTTGTCGAGCCATCCATGCTTCTCGAAGAATGCTCTTTGCAAGGAGCAGTTGCAGGCTGTGTCAAAAACACTTGGGGAAGCGATTGAATTGGCTGAGTTGTGTGTGAAGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGTGATCTAGATGCATTGGCTGGGAAGCTTGATTTGAATTTGAGGGATTGTGGGCTTCTGATCAAGACTGGTGTGCTTGGTGAGGCTACTTTGCCATTGGCTGTGTCTAGTTCTGTGGCAGAATCAGATGTTGCAACACACAACAACATAAGGGAGTTGCTGGCGCGCCTTCAGATCGGGCACTTGGAAGCGAAGCACCGAGCTTTAGACAGCGTTGTTGAGGCCATGAAGGAGGATGAGAAGAGTGTTTTAGCTGTTCTTGGTCGGAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGGATAAGAGAAAAAACAGTTACTGTAATATGCTCACTTGCAGAAACTGGTAGCTGTGAAAATTGGCTAGTTTCTGAAGGAGTTCTGCCTCCTCTTATAAGGCTTGTTGAATCCGGCAGTGTGGTGGGGAAGGAGAAGGCAACAATATCCCTTCAGAGGTTGTCGATGTCAGCCGAAACAGCGCGAGCAATCGTGGGACATGGCGGGGTTCGTCCATTGGTTGCACTTTGTCAAACCGGTGATTCTGTGTCACAGGCCGCGGCTGCATGTACTCTGAAGAACATATCAGCTGTTCCTGAGGTGAGACAAGCATTGGCTGAAGAAGGGATTGTGACGGTAATGATCAATCTGCTTAACTGTGGAATTCTGTTAGGTTCCAAAGAGCATGCTGCAGAGTGCTTGCAGAACCTCACTGCAAGCAATGAGAATCTAAGGAAGAGTGTCATATCAGAAGGTGGTGTTAGGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAGGAATCTGCGGTTGGAGCATTGAGGAACTTGGTTGGATTAGTCCCTGAGGAATCCTTGGTTTCCCTCGGTTTGATCCCCCGTCTGACTCATGTGTTAAAGTCCGGATCCTTAGGTGCTCAGCAAGCAGCTGCGGCTGCGATATGCTGCGCTTGCAGTTCCACAGACATGAAGAAAATGGTTGGTGAAGCTGGCTGCATCCCTCTCCTTGTGAAGATGCTTGAGGCCAAGTCAAACAGTGTTAGAGAGGTTGCTGCTCAAGCAATAGCAAGCTTGATGGTTGTGTCTCAGAATCGAAGAGAGGTTAAGAAGGATGATAAGAGTGTGCCAAACTTGGTTCAGTTGCTTGATCCAAGCCCTCAGAATACTGCAAAAAAATATGCAGTTACTTGCCTTGGATCACTTTCTTCATGTAAGAAATGTAAGAAGCTAATGATCTCGTATGGGGCAATTGGGTATCTGAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTGCATGAAAGGTTGGAAAGAGGGAAATTTAGAAGTTTGTTTAGCAAGAAATAG 1674 0.4689 MVEDGDEVDARSTEDWLLHAQELVPVVLDKAREVKGFAGRWKMIVAKLEQIPSQLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCVKEKYEGKLRMQSDLDALAGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVATHNNIRELLARLQIGHLEAKHRALDSVVEAMKEDEKSVLAVLGRSNIAALVQLLTATSPRIREKTVTVICSLAETGSCENWLVSEGVLPPLIRLVESGSVVGKEKATISLQRLSMSAETARAIVGHGGVRPLVALCQTGDSVSQAAAACTLKNISAVPEVRQALAEEGIVTVMINLLNCGILLGSKEHAAECLQNLTASNENLRKSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGLVPEESLVSLGLIPRLTHVLKSGSLGAQQAAAAAICCACSSTDMKKMVGEAGCIPLLVKMLEAKSNSVREVAAQAIASLMVVSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVTCLGSLSSCKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKFRSLFSKK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02096 557 SUPERFAMILY ARM repeat 153 534 IPR016024 -
Gma18g02096 557 SMART arm_5 305 346 IPR000225 GO:0005515
Gma18g02096 557 SMART arm_5 347 386 IPR000225 GO:0005515
Gma18g02096 557 SMART arm_5 182 222 IPR000225 GO:0005515
Gma18g02096 557 SMART arm_5 427 467 IPR000225 GO:0005515
Gma18g02096 557 SMART arm_5 389 426 IPR000225 GO:0005515
Gma18g02096 557 SMART arm_5 468 510 IPR000225 GO:0005515
Gma18g02096 557 SMART arm_5 264 304 IPR000225 GO:0005515
Gma18g02096 557 Gene3D - 187 330 IPR011989 -
Gma18g02096 557 Pfam Armadillo/beta-catenin-like repeat 428 465 IPR000225 GO:0005515
Gma18g02096 557 Pfam Armadillo/beta-catenin-like repeat 268 304 IPR000225 GO:0005515
Gma18g02096 557 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 557 - -
Gma18g02096 557 Gene3D - 331 540 IPR011989 -
Gma18g02096 557 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 7 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02096 Gma-Chr18 54676315 54677988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02096 203 476 U-box Gene Family AT3G54790 26.978 5.30e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02096 - - gmx:100789140 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02096 18 54676315 54677988 Gma18g02096 18 54676315 54677988 ECH
Gma18g02096 18 54676315 54677988 Gma09g02420 09 49522127 49525829 GST