Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02090 ATGGCACAACAATTTCAAGAACCCCCGTTGTTCTCCCATGTTGCTAACACTTGCATCAATCATGTAGTCTACATAACAATCATTTTAACAAGTTTTGATCCGAGCAGTGCTGCCGAAGTTTGTCGAATGCAGTCACCACCAATTGAACGCGACATTTTCAATCATCCGTCTATATGTCATGATATATTAAGGCAATTGCTTGCATACTCGTTTGTACCTATAAACTTTTACATTGGCCAGGACTGTGACCTAATTCCAAACCTTTCTACTAGGTTATGCGAGTCAGTATTACAGCGATCCGGGGTTCATATAAATTATTTTCAGGTGTTCATTACGGTATTCCAGACCCACTGTTGTTATAATGTAGTGGGTACACCATTTTTTTTTCAAGCTGATGAACTTCCATCAAGAGAAATGGTGCAAAGAATGACCTGTGATGGCGGTGAACATTCTTTGCCTGCGGGGGCAATGGCACTCAAAAGATTTTTGATTCAAGATGAACAGGAGGATCCATGTGCCATATGCATCAAGGATTTCAACTCTGGTGATAATGCAGCAAGGTTGCCTTGCTCTCATGTCTTCCACCCTGATTGTATTTTGCAATGGTTTGTTCAGAAGAGTACGTGCCCTTTGTGCTGTTTCGCTTGTAGTTGTGTCTCTTGA 663 0.4133 MAQQFQEPPLFSHVANTCINHVVYITIILTSFDPSSAAEVCRMQSPPIERDIFNHPSICHDILRQLLAYSFVPINFYIGQDCDLIPNLSTRLCESVLQRSGVHINYFQVFITVFQTHCCYNVVGTPFFFQADELPSREMVQRMTCDGGEHSLPAGAMALKRFLIQDEQEDPCAICIKDFNSGDNAARLPCSHVFHPDCILQWFVQKSTCPLCCFACSCVS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02090 220 PANTHER SI:CH211-59O9.10 164 216 - -
Gma18g02090 220 Pfam Ring finger domain 172 212 IPR001841 -
Gma18g02090 220 PANTHER SI:CH211-59O9.10 164 216 - -
Gma18g02090 220 SUPERFAMILY RING/U-box 165 215 - -
Gma18g02090 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 217 IPR013083 -
Gma18g02090 220 ProSiteProfiles Zinc finger RING-type profile. 172 212 IPR001841 -
Gma18g02090 220 SMART ring_2 172 212 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02090 Gma-Chr18 54464552 54465214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02090 134 214 C3H Transcription Factor Family AT1G14200 31.818 6.36e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02090 - K22378 gsj:114396617 187.963