Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02086 ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGGACTTCCGTTTCATCAGATCCTGGAGGGGATTGTACCACAAAAAGAGTAAAGTTTGATCAAGAAACCGAAGGAAAGGTCAATGAGGAAACATATCCTAATGAGAGATGCGGAAAAGATCAGGAGCAGTATGTAGATGCATTAAAAGAAAGTGTTAATTCTAATGTTCCTTCAGTGGCTAGAACTGAGAAGTCAGGTTTTGATCAGCTTCCAAAAGAATTAAATGAAATGAAGATTGGAGACGACAAAGGCAAAAACAACAATAAGAAGGATATGGAAGCAACTATTGTGAATGGTAATGGAACAGAAACAGGTCAAATAACTACAACTGTTATTGGTGGTCGAGACGGACAACCAAAGCGGACAATCTCATACATGGCAGAACGTGTGGTTGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGCCTTGAAACTGGAGAAGCAGTCGCCATAAAAAAAGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTGCAGGTTATGCGTATGCTTGACCATACTAATGTTCTCAGACTAAAGCACTGTTTCTATTCAACAGCTGAGAAAGATGATTTGTACCTTAACCTAGTTTTGGAGTATGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATATCAGAATGCACCAGCATATGCCTATCATTAATGTGCAACTGTATACATACCAGATATGCCGTGGTTTAAATTATTTGCATCATGTGATCAGAGTCTGTCATCGGGACATTAAACCCCAGAATCTATTGGTTAATCCCCAGACTCATCAGTTAAAAGTATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGCGAACCCAACATATCGTACATATGCTCGCGGTATTATAGAGCTCCAGAACTTATATTTGGTGCAACAGAATACACAACTGCTATTGATATTTGGTCTGCTGGTTGTGTGTTGGCTGAGCTTCTTGTAGGACATCCAATGTTTCCCGGAGAGAGTGGGGTTGATCAATTGGTAGAGATCATTAAGATCTTGGGAACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACCGAATTTAAGTTTCCTCAGATAAAAGCACACCCATGGCATAAGGTTTTTCACAAGAAGATGCCTTCAGAAGCAGTGGATCTAGTGTCAAGGATGCTTCAGTATTCACCAAATCTACGATGCACTGCTTTGGAAGCATGTGCACACCCTTTCTTTGATGATCTGCGAGAACCAAATGCATGCTTGCCAAATGGGCAATCATTGCCTCCATTGTTCGATTTCACTGCTCAAGAACTGGCAGGTGCACCTGATGAGTTGCGGCGACGTCTCATTCCTGAGCATGCAAGAAGTTGA 1404 0.4124 MNMMRRLKSIASGRTSVSSDPGGDCTTKRVKFDQETEGKVNEETYPNERCGKDQEQYVDALKESVNSNVPSVARTEKSGFDQLPKELNEMKIGDDKGKNNNKKDMEATIVNGNGTETGQITTTVIGGRDGQPKRTISYMAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDKRYKNRELQVMRMLDHTNVLRLKHCFYSTAEKDDLYLNLVLEYVPETVYRVSKHYIRMHQHMPIINVQLYTYQICRGLNYLHHVIRVCHRDIKPQNLLVNPQTHQLKVCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLVGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPSEAVDLVSRMLQYSPNLRCTALEACAHPFFDDLREPNACLPNGQSLPPLFDFTAQELAGAPDELRRRLIPEHARS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02086 467 PANTHER SHAGGY-LIKE KINASE 6 467 - -
Gma18g02086 467 SUPERFAMILY Protein kinase-like (PK-like) 137 446 IPR011009 -
Gma18g02086 467 ProSiteProfiles Protein kinase domain profile. 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02086 467 Gene3D Transferase(Phosphotransferase) domain 1 218 466 - -
Gma18g02086 467 SMART serkin_6 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02086 467 ProSitePatterns Protein kinases ATP-binding region signature. 144 168 IPR017441 GO:0005524
Gma18g02086 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Gma18g02086 467 MobiDBLite consensus disorder prediction 1 28 - -
Gma18g02086 467 Gene3D Phosphorylase Kinase; domain 1 124 217 - -
Gma18g02086 467 MobiDBLite consensus disorder prediction 9 23 - -
Gma18g02086 467 CDD STKc_GSK3 133 425 IPR039192 -
Gma18g02086 467 Pfam Protein kinase domain 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02086 467 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02086 Gma-Chr18 54386370 54390467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02086 144 431 Core Cell Cycle Gene Families AT1G76540 35.548 9.30e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma18g02086 Pkinase 2.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02086 K00924 - gmx:100786458 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02086 18 54386370 54390467 Gma18g02086 18 54386370 54390467 ECH
Gma18g02086 18 54386370 54390467 Gma09g02430 09 49624397 49628964 GST