Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02080 ATGCTAAGCTGGGCTGCTTGTGATGAAATCTTGTCAGTGTTCACCAGGTTGCACGTGTTGATTCTGAAAAATTTAGGCATGAAGGTGTTGCCGGGTTCAATTGGGGACTTGAAGAGTTTGAGATACCTCGATTTGTCTCGCAACAACTTCAACAAACTTCCTATTTGCATAGGTGAGTTGCTGCATTTGCAGACCTTGCAACTGTCCCACTGTCTCAAGCTTAAAGAATTGCCGGATGATGTGAACTATTTTGCGAGTTTGAGGCATCTGGAGGTGGATGAATGCACAAATCTGATGCACATGCCATCTGCGTTAAGGAAACTGACTTGGCTTCGGTCATTGCCGCATTTCGTGACCAGCAAACGCAACAGTCTTGGAGAACTCATTGATCTCAATGAGGTCCGGGGAGAGTTGGAGATTTCACACTAA 429 0.4545 MLSWAACDEILSVFTRLHVLILKNLGMKVLPGSIGDLKSLRYLDLSRNNFNKLPICIGELLHLQTLQLSHCLKLKELPDDVNYFASLRHLEVDECTNLMHMPSALRKLTWLRSLPHFVTSKRNSLGELIDLNEVRGELEISH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02080 142 SUPERFAMILY L domain-like 9 135 - -
Gma18g02080 142 PANTHER LRR RECEPTOR-LIKE KINASE 12 122 - -
Gma18g02080 142 Pfam Leucine rich repeat 16 71 IPR001611 GO:0005515
Gma18g02080 142 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 12 122 - -
Gma18g02080 142 Gene3D Ribonuclease Inhibitor 3 135 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02080 Gma-Chr18 54360103 54360531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02080 27 124 WRKY Transcription Factor Family AT4G12020 38.384 1.22e-09 53.5