Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02045 ATGAGTAGTGGTAACGGGGGTGGTGGTAGTAGTAGTGGTACTGGTAGCCCTTGTGGAGCTTGCAAGTTCTTAAGGAGAAAGTGTGTTTCGGGTTGTATCTTTGCTCCGTACTTTGATTCGGAGCAAGGTACAAGCCATTTTGCTGCGGTGCACAAGGTTTTTGGGGCCAGCAATGTCTCCAAGCTCCTTCTTAGCATTCCAGTGCATAGGAGGCTTGATACGGTCATCACCATTTGTTATGAAGCACAATCAAGGATCAGAGATCCAGTTTATGGCTGTGTTGCCCACATCTTTGCCCTTCAGCAACAGCTGGTAAGCTTACAAGCAGAACTCTCTTACCTACATGGCCACCTTGCTCAAATGGAGTTACCTCAACCATCACCACCTCCTCCACCACCGCAAACAACGGCAGCACCACCCTCCGGTTTCTCAATTGCCGACCTACCGCCGGCCACAGTTGCGGCAGTGCCGGCCACCACCTATGATTTGTCTTCACTTTTTGATCCACTGGGCCAAACTTCATGGGCCATGCAACAGAGGGCCATAGACTTACGTCAATACCTAGCTGCTGCTGCTGCTCCATCAACCACCTCTGGTGCTGACATTCAAGCCGTGGCACGTGACATTCCTCATAGACATGGGTCTCCTCCATCACCTCCTGCGTCAAGCTCCAATGCTTCACCATCTCTATCGCATTCTAAATGA 705 0.5078 MSSGNGGGGSSSGTGSPCGACKFLRRKCVSGCIFAPYFDSEQGTSHFAAVHKVFGASNVSKLLLSIPVHRRLDTVITICYEAQSRIRDPVYGCVAHIFALQQQLVSLQAELSYLHGHLAQMELPQPSPPPPPPQTTAAPPSGFSIADLPPATVAAVPATTYDLSSLFDPLGQTSWAMQQRAIDLRQYLAAAAAPSTTSGADIQAVARDIPHRHGSPPSPPASSSNASPSLSHSK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02045 234 MobiDBLite consensus disorder prediction 197 234 - -
Gma18g02045 234 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Gma18g02045 234 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Gma18g02045 234 MobiDBLite consensus disorder prediction 121 143 - -
Gma18g02045 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 3 214 - -
Gma18g02045 234 MobiDBLite consensus disorder prediction 123 138 - -
Gma18g02045 234 PANTHER LOB DOMAIN CONTAINING PROTEIN 3 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02045 Gma-Chr18 53818761 53822819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02045 20 234 AS2 family AT2G45420 59.649 6.03e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma18g02045 LOB 8.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02045 K21994 - gmx:100777737 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02045 18 53818761 53822819 Gma18g02045 18 53818761 53822819 ECH
Gma18g02045 18 53818761 53822819 Gma09g02458 09 49936397 49939867 GST
Gma18g02045 18 53818761 53822819 Gma01g01481 01 49989383 49994103 PCT
Gma01g01481 01 49989383 49994103 Gma18g02045 18 53818761 53822819 PCT