Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02036 ATGGCTGCTTGTGCTTTGTTCAGTGCTGGCGGTAACATTACCGAAGATGGCAATGTTAATGGAAGTGGAAGTGCTTCTAGTACTCCTTTGACAAGTGCCTCTAACTCTAGCAGCATGAGCAACGAAGAAAAAAAACACAACCTACATGGTGGTGGCATCATGCCACAGCCTCATTGTGAAAGAAAAATGGTGAGAAAAAGAATGGCTTCTGAGATGGAAGTTAACGTTCACGCAACTCCACCACACAACTCTTCCTCCACAACAAGTGATTATCCTAGGTTTCCTCGTCGAAGCAGCACCAACATGAACATGTTAGAAAAAGGGTCCACCAGTACCACCACAGCAACAACAACAACATTAGCCgaaggtacatgtaataataataataataataataataataataataatagtaattgtagtagctatcattataataatagtaacaatagtaatagtggtaatatttcatcaaGAGATAACGTTGCTATTCCAAATTACCCCACTGTGACGGTCACAACCAACTACTCCACTATGTTGCTACCTTCATCCACCACCACCACTATCAATTCCTCTGGTGTTGCTCCAAACTACATCACTCACCACCAACACCATCATTTCCAAGGACTCGTTGAAAGCCAGGACCATCAGCAAAACCCTGTGCCTGCAGTTTGTGGATTCTCAGGGTTACCACTTTTTCCATCTCAAAGCCAAAGAAACCGAGACAGCAACAACACCCCCACCACCAACAACATAAGAAACAGTGGTGGAAATATTGTTGACGTGGTTGCTTCTTCTTCTTCTTCTTCTTCCATGGATGACACTTCAGCAGCAGCAGCAACAAGTGGTTGGATCGATGGTATATTGAAGGATCTCATTCACAGTTCCAACAGTGTTTCGATTCCTCAACTAATCAGCAACGTGAGGGAGATCATATACCCTTGCAACCCCAACCTTGCAATGGTTCTTGAATACAGGTTGCGTCTTCTTCTCACTGAGTCTACAACACAAAACAAAAGAGGCACAGAAGGGGTGCCTCTTCCTCCTTCTGTTTCCTCAGTGAAGCTCACGAGCAACCGTGTTGTCGATGGCATTGTTCCTAATTTGCACTTCACAGATGCTTCAGGTGGTGCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGGTGTGCCTCAAATCACTCATCACCATGATAACAACACCAACACCAACACCAACAATAGCAACAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCAACACCGCCGCTACCACCACCTCATTATTCACCACCACAAGAGAAGCACCCTCAAGAAGAGGATCTAGCAGCAACCAGCACGGCTGAGGTGGCACTTTCAAGAAAGAAGAAAGAGGAGCTGCGTGAACAGAAGAAGAAAGACGAAGAGGGTTTGCATCTTCTCACTTTGCTGCTTCAGTGTGCAGAAGCGGTTTCATCTGAGAATCTAGAAGATGCCAACAAGATGCTGCTGGAGATTTCTCAGTTGTCAACACCCTTCGGCACTTCAGCACAGCGTGTGGCAGCATATTTCTCAGAAGCCATATCAGCAAGGTTGGTGAGTTCATGCTTAGGGATATATGCCACTTTGCCACACACTCACCAAAGCCACAAGGTGGCTTCGGCTTTTCAAGTGTTCAATGGTATTAGTCCTTTCGTGAAGTTCTCACACTTCACAGCAAACCAAGCTATTCAAGAAGCTTTCGAGAGGGAAGAGAGGGTGCACATCATAGATCTTGACATAATGCAAGGGTTGCAGTGGCCTGGTTTGTTTCACATTCTAGCTTCAAGACCTGGTGGAGCACCTTATGTGAGGCTCACAGGGCTTGGTACCTCTATGGAAGCACTTGAAGCCACGGGAAAACGCTTGTCTGATTTTGCAAACAAACTTGGCCTTCCCTTTGAGTTCTTCCCTGTGGCTGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTCAATGTTTGCAAAACCGAAGCTGTTGCTGTTCACTGGTTGCAACATTCCCTCTATGATGTCACTGGCTCAGACACCAACACCTTGTGGCTCTTGCAGAGGCTGGCACCTAAAGTGGTGACTGTGGTGGAGCAGGACCTAAGCAACACTGGTTCATTCTTGGGGAGGTTTGTGGAAGCCATACACTACTACTCAGCATTATTTGACTCTCTTGGGTCAAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTGGTGGAACAGCAACTATTGTCTAGGGAGATTCGAAATGTGCTAGCTGTTGGGGGGCCATCAAGGACTGGAGAGCCAAAGTTTCATAACTGGAGGGAAAAGCTTCAACAGTGTGGGTTTAGAGGCATATCTCTAGCTGGTAATGCTGCCACACAAGCTAGTCTACTCCTTGGTATGTTCCCATCTGAGGGCTATACCTTGGTGGAGGACAATGGCATTCTTAAACTTGGTTGGAAGGACCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCACCCTTCCATAGTGCCATTACCCATCACAACTAG 2529 0.4508 MAACALFSAGGNITEDGNVNGSGSASSTPLTSASNSSSMSNEEKKHNLHGGGIMPQPHCERKMVRKRMASEMEVNVHATPPHNSSSTTSDYPRFPRRSSTNMNMLEKGSTSTTTATTTTLAEGTCNNNNNNNNNNNNSNCSSYHYNNSNNSNSGNISSRDNVAIPNYPTVTVTTNYSTMLLPSSTTTTINSSGVAPNYITHHQHHHFQGLVESQDHQQNPVPAVCGFSGLPLFPSQSQRNRDSNNTPTTNNIRNSGGNIVDVVASSSSSSSMDDTSAAAATSGWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLAMVLEYRLRLLLTESTTQNKRGTEGVPLPPSVSSVKLTSNRVVDGIVPNLHFTDASGGAVVVNQHMLSNWGVPQITHHHDNNTNTNTNNSNNPSVSLVTLPSPTPPLPPPHYSPPQEKHPQEEDLAATSTAEVALSRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSSENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGAPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLNVCKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHSAITHHN 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02036 842 MobiDBLite consensus disorder prediction 234 258 - -
Gma18g02036 842 MobiDBLite consensus disorder prediction 418 434 - -
Gma18g02036 842 MobiDBLite consensus disorder prediction 75 146 - -
Gma18g02036 842 MobiDBLite consensus disorder prediction 10 58 - -
Gma18g02036 842 ProSiteProfiles GRAS family profile. 466 831 IPR005202 -
Gma18g02036 842 Pfam GRAS domain family 476 831 IPR005202 -
Gma18g02036 842 MobiDBLite consensus disorder prediction 77 146 - -
Gma18g02036 842 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 182 833 IPR005202 -
Gma18g02036 842 PANTHER PROTEIN SCARECROW 182 833 - -
Gma18g02036 842 MobiDBLite consensus disorder prediction 392 444 - -
Gma18g02036 842 MobiDBLite consensus disorder prediction 13 41 - -
Gma18g02036 842 MobiDBLite consensus disorder prediction 392 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02036 Gma-Chr18 53708913 53712447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02036 439 832 GRAS Transcription Factor Family AT3G54220 82.222 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma18g02036 GRAS 1.7e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02036 - - gmx:100806779 1475.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02036 18 53708913 53712447 Gma18g02036 18 53708913 53712447 ECH
Gma18g02036 18 53708913 53712447 Gma09g02467 09 50027479 50030906 GST