Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02032 ATGCATTCGAATTCCTTCAAGCTCATCTTCCTTTGTACCCTTGTTATTTTGTTCAATTTCCCAACTACTAAAGCACAGGAGTCCCACGATTATCTTAACCAAATGTGCAGTGAAAGCGAAATCCCTGCCAACAGCACCTATGAAAAGAACCTGAGGACTCTCTTCTCTTCCTTATCTTCGAAGGCAACCGCCAAAACATTCTTCTACGACACAGTGGTGGGCAGAAACTCCTTTGACACGGTGTATGGTATGTTCATGTGCAGGGGTGATGTACCCTCTCAACTCTGTGGGCAGTGTGTGGTAAATGCAACCCACACCCGAGATTCAGAGCCAGGTTGTTCCAGGTCCATATGGGATGTGATTTGGTACGAGGAGTGCATGGTTCGGTATTCCAACGTCCCTTTCTACTCCAAAGTGGCCACACATCCCTTCTGTTACAAGTGGAGCTTGGCCAATATCTCCTCCAACCCAGCAAGTTTCATGAGTTTGTTGTACAACACCATGAACCAAACTGCACATGAAGCAGCCATTTCTGGTAACATGTACTCCACAAAGCAAGCAAACTATTCTAATTCTGAGACCCTATACTGTCTGGCTCAGTGCACACAAGACCTCTCACCCCAAAACTGCACAGCCTGTCTTACTCAAGCAATAGAGTACCTCCCAAACTGCTGTGAAGGAAAGCAAGGAGGTAGAGTTTTGTTTCCCAGTTGTAACATTAGGTATGAATTGTACCCTTTCTTCCGCAATGTCACGGATGAGGCACTACCAGAAGGAATTGTTCCTGAGACAAAATATTCACACACGGATTCAGAATATTCAGAAGATCCTGGCTATATTTCTCACAACTGCTCAACCGACCAAATCATTAACGATACTGCTTTCGAATCAAACCTCAAGACCCTCTTCTCTGATTTGACTTCCAACGCCACCAGTGGCAACAGAAACAGCAAAAGAGCGGGAGCGGGAACACTGCAAGGCTTCTTCACGTGTCGTGTCGACCTTTCTCGTACCCTTTGTGGAGAATGCGTCCAAAACGCAACGGAGAAAATATTCTCCGCGTGTGGTTTGGCTGCGGAGGGTGTGATTTGGTACAATCACTGCTGGCTTCGCTATTCAAATCGATCATTTGCCATGGAAACAAGTCCCAGCTATGTGGATCTGAATGTCACCGACACCGATAATCGGGTGCAATATTCCTCTCATGCTTTGACATTGATATCCAATAAATTAGCTGCAATGGCGGATGGCACGGGCCAAACTCTTGACAAATATCAAAGTGGAACATTGATATTGAATAATAAACAAAGGGTGTATATTCTTGCTCAGTGTGCATTGGATCTATCTAGTGAAGATTGCGGTGCCTGCCTAAGTGATATGATTGGATCAGCAATTCCATGGACTCGTTTGGGAAGCCTAGGTGGCAGAGTTCTGTATCCTACCTGTATTCTCCGCTTTGAACTGTTCCAGTTTTACGATCTGATTCCCACCACAGCAATCACTCATCCACTTCTACTAGCACCAGCATCAGGAAAAGGTCGATCACGAACTATTATCTTGATCCTTACCTCCGCCATCATTGTTTTGGGGGTACTTTTCACCTTTTGCTACTATTTGATTCGAAGAAAAGCAAGGAATAATAAAACTATTCTCAGAGAAAACTttggacatgaaagttccaccatagagtcattgcaattcaatttgccaacaattgtagcagctacaaacaacttttcatatgagaacaagattggcaaaggaggatttggggaagtttataagggcattcttagcgatgaaagaccaatagcagtaaagaggctctcaagaacttcaaagcaaggtgtagaggagtttaaaaatgaggttttgttgatagccaaacttcaacatagaaatttagtgacatttattggattttgtcttgaagagcaagagaaaatacttatatatgaatacgtgccaaacaagagtctcgactacttcttatttgatactaaattagaaaagattttgacttggtctgagcgtcacaaaatcatagaaggaattgctcgaggaattttatatttacacgaatattctcgacttaaaattatacatcgtgatcttaaacctagtaatgtactattagacaaaaatatgaatccaaagatttcagattttggacttgctaaaattgttgaactagatcaacaagaaggaagtacaaatagaattattggaacatacggctttatggctccagaATTGGCTATAGCAGAAAACAAAGGTGGATGGAGTGCTCTTAGTAACCACTCTTTGGAGTATCTGGTTATCAGGAATGATGAACTCGTTTTTGTTATACCAGCTTGTGTCTAA 2364 0.3338 MHSNSFKLIFLCTLVILFNFPTTKAQESHDYLNQMCSESEIPANSTYEKNLRTLFSSLSSKATAKTFFYDTVVGRNSFDTVYGMFMCRGDVPSQLCGQCVVNATHTRDSEPGCSRSIWDVIWYEECMVRYSNVPFYSKVATHPFCYKWSLANISSNPASFMSLLYNTMNQTAHEAAISGNMYSTKQANYSNSETLYCLAQCTQDLSPQNCTACLTQAIEYLPNCCEGKQGGRVLFPSCNIRYELYPFFRNVTDEALPEGIVPETKYSHTDSEYSEDPGYISHNCSTDQIINDTAFESNLKTLFSDLTSNATSGNRNSKRAGAGTLQGFFTCRVDLSRTLCGECVQNATEKIFSACGLAAEGVIWYNHCWLRYSNRSFAMETSPSYVDLNVTDTDNRVQYSSHALTLISNKLAAMADGTGQTLDKYQSGTLILNNKQRVYILAQCALDLSSEDCGACLSDMIGSAIPWTRLGSLGGRVLYPTCILRFELFQFYDLIPTTAITHPLLLAPASGKGRSRTIILILTSAIIVLGVLFTFCYYLIRRKARNNKTILRENFGHESSTIESLQFNLPTIVAATNNFSYENKIGKGGFGEVYKGILSDERPIAVKRLSRTSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEEQEKILIYEYVPNKSLDYFLFDTKLEKILTWSERHKIIEGIARGILYLHEYSRLKIIHRDLKPSNVLLDKNMNPKISDFGLAKIVELDQQEGSTNRIIGTYGFMAPELAIAENKGGWSALSNHSLEYLVIRNDELVFVIPACV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02032 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Gma18g02032 787 Gene3D Phosphorylase Kinase; domain 1 541 654 - -
Gma18g02032 787 Gene3D Transferase(Phosphotransferase) domain 1 655 765 - -
Gma18g02032 787 Pfam Protein kinase domain 581 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02032 787 Gene3D - 384 491 IPR038408 -
Gma18g02032 787 Gene3D - 28 135 IPR038408 -
Gma18g02032 787 Gene3D - 277 377 IPR038408 -
Gma18g02032 787 Gene3D - 143 247 IPR038408 -
Gma18g02032 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 506 754 - -
Gma18g02032 787 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
Gma18g02032 787 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
Gma18g02032 787 SUPERFAMILY Protein kinase-like (PK-like) 558 756 IPR011009 -
Gma18g02032 787 ProSiteProfiles Gnk2-homologous domain profile. 277 377 IPR002902 -
Gma18g02032 787 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 506 754 - -
Gma18g02032 787 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 269 493 - -
Gma18g02032 787 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 18 257 - -
Gma18g02032 787 ProSiteProfiles Protein kinase domain profile. 579 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02032 787 ProSitePatterns Protein kinases ATP-binding region signature. 585 607 IPR017441 GO:0005524
Gma18g02032 787 SMART serkin_6 579 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02032 787 Pfam Salt stress response/antifungal 284 374 IPR002902 -
Gma18g02032 787 Pfam Salt stress response/antifungal 397 487 IPR002902 -
Gma18g02032 787 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Gma18g02032 787 Pfam Salt stress response/antifungal 152 245 IPR002902 -
Gma18g02032 787 ProSiteProfiles Gnk2-homologous domain profile. 381 491 IPR002902 -
Gma18g02032 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 269 493 - -
Gma18g02032 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02032 Gma-Chr18 53644261 53650838 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02032 274 774 Receptor kinase-like Gene Family AT4G05200 41.509 2.97e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma18g02032 Pkinase 8.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02032 - - gmx:100805181 1530.77