Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02029 ATGGCTTCCAATTCCTTCATGCTCGTCTTCCTTTGCGTCCTTGTTACCTTGTTCAACTTTGCAACCACTACTAAAGCACAGAACGTGGACCAGGTTTATTTTGTTTCCCAAAGTTGCAGTGCAAACAAAACCACTGCCAACAGCGcctacgaaaagaaccttaagacccttctctcttccttatcttccaacgccactacaaccttattctacaacaacacagtcctcggcagcacaaacactacctctgacacagtgtacggtctattcatgtgcaggggtgatataccccttcgcctctgcaaagaatgcgtggcgaacgcaacccagaaactatcttcagatcaaagctgttctctttcgaaacaggctgtgatgtggtacgctgaatgcatagttcggtattccaacgtcggcttcttctccaccgtgtccacatctcccgaatattctttgtataacccgaacgacatcaccgacaactcaacaaacagtttcatgaacttcttgtccaacaccattaaccaaactGCAGAAGCCGCAGCCAATTCTGCTAAAAGGTTCTCAACAAAGGAAGCAAACTTGTCTCAGTCTCAGACCCTTTACTGTCTGGCTCAGTGCACAGAAGACTTGCCACCCCAAAACTGCACAACCTGTCTTGCGCAAGCAATACGTGAGCTTCCAATATGTTGTTATGCAaaacaaggaggaagagtagggtttcccagttgcaacgtttggtatgaactgtaccctttctacggcctcatcacggatcagactccaagtccaaccagtactcctcttcctcctcctccatcatcaTCATCATCAGGGAAAGGTCAACCACGGAATATTATTTTGATCCTTACCTCCAGCATTACTCTACCAGGGATACTTTTCACCTTTTActattatttcatacgcagaaaagcaaaaaagaataacaaaactattcttaggaaaaattttgggcatgaaacttccaccatagagtcattgcaattcaacttagcaataattgaaacagcaacaaacaacttttcacacgagaacaagattggtaaaggtggatttggagaagtttataagggaattcttattgatggaagacctatagctgtaaagagactctcaagaaattctaagcaaggtgttgaggagttcaaaaatgaagttctattgatagccaagcttcaacatagaaatctagtagccttcataggattttgtcttgatgagcaagagaagatacttatttatgaatatgttccaaacaaaagtcttgattacttcttatttgatactaaactagaaaaggttttgagttggtctgatcgtcacaaaatcataggaggaattgctcgaggaattttatatttacatgaacattctagacttaaagttatacatcgtgatcttaaacctagcaatgtattgttggacgaaaatatgaatccaaaaatttcagattttggtcttgctagaattgttgaaatagatcaacaggaaggaagtacaaatagaattattggaacatatggctatatgtctccagagtatgctatgtttggacaattttcagacaaatcagatgtttatagctttggagttatgattctcgagattattagtggaaaaaagaatataggctcctacgaaccacatcgtgttgctgatggtcttctaaattttgtttggagacattggaaggatgaaacaccattgaacacattggaccccaaattaagagataattattctaacattgaagtcatcaaatgcattcgaattgGAAAGCAGGAAAAAAACAAAAAGGAGCAGATGGGTAGCTCAGGTTTCTCATGGAAATTGGCGGATCATCCAAAGCTTCCAAAGGGTAAGACTGTGGCTGTTGTGGTATTGGATGGTTGGGGAGAGGCCACACCCAATGAGTACAACTGCATCCACAAGGCTGAAACACCCTGCATGGATTCACTTAAAAAGGGTGCTCCTGAACGGTGGAGATTGGTCAGGGCTCATGGTACTGCTGTAGGACTTCCAACAGAAGATGACATGGGCAATAGTGAAGTTGGTCACAATGCCCTTGGGGCTGGTCGCATATTTGCTCAGGGTGCTAAGCTTGTCGACCTTGCTCTAGCCTCTGGAAAAATTTTTGAAGGAGAAGGTTTCAAGTACATAAAGGAATGTTTTGAAAATGGCACATTGCATCTCATTGGGCTACTGAGTGATGGTGGAGTTCACTCCAGACTTGATCAGTTGCAGTTGTTGCTTAAAGGAGTTAGTGAGCGAGGTGTTAAAAGAGTCCGTGTCCATATTCTTACAGATGGCCGTGATGTTTTGGATGGCTCAAGTGTGGGGTTTGTGGAAACCCTTGAAAATGATCTTGCAAACTTGCGCGCAAAAGGTGTCGATGCTAGGATAGCATCAGGTGGAGGTCGTATGAATGTCACAATGGATCGTTATGAGAATGATTGGAGTGTTGTGAAACGAGGGTGGGATGCTCAAGTTCTTGGTGAAGCCCCTTATAAGTTTACAAATGCTCTTGAAGCTGTCAAGAAGCTGAGGGCAGAACCAAAGGCCAATGACCAATATTTGCCTCCTTTTGTTATTGTTGACGAGAGTGGGAAACCTGTTGGTCCGATAGTTGATGGTGATGCTGTTGTTACATTCAACTTCCGAGCTGATCGTATGACAATGATTGCTAAAGCTCTTGAGTATGAAAATTTTGACAAATTTGATAGAGTTCGTTACCCAAAAATCCGCTATGCTGGAATGCTTGAATATGATGGTGAATTGAAACTTCCAAGTCATTACCTTGTTTCTCCACCAGAGATTGACAGGACTTCTGGTGAATATTTAGTGTATAATGGTATTCGGACTTTTGCTTGCAGTGAGACTGTTAAATTTGGCCACGTCACATTCTTCTGGAATGGAAACCGCTCTGGGTATTTTAATGCAGAATTGGAGGAATATGTGGAAATTCCTAGTGATTCTGGGATTACATTCAATGAACAACCATTAATGAAAGCATTGCAGATTGCTGAAAAGGCTAGGGATGCTATTCTTAGCGGGAAATTTGATCAGGTACGCGTCAACCTTCCAAATGGTGACATGGTGGGGCATACAGGTGACATTGAAGCAACAGTTGTGGCATGCAAGGCAGCTGATGCTGCTGTGAAGATGATTCTTGATGCAATAGAGCAAGTGGGTGGAATTTATGTTGTCACAGCTGACCACGGGAATGCTGAGGATATGGTCAAGAGGGATAAATCTGGAAAACCACTTCTAGGCAAGGATGGAAAAATCCAGATTCTTACTTCCCATACTCTTGAGCCTGTGCCAATTGCTATTGGAGGTCCTGGATTGGCCCCTGGTGTCAGATTCCGCAACAATGTTCCAACTGGTGGACTTGCCAACGTTGCTGCAACTGTGATGAATCTTCATGGATTTGAGGCTCCCAGCGACTACGAGACAACTCTGATAGAAGTAGTTGATAACTAG 3504 0.2677 MASNSFMLVFLCVLVTLFNFATTTKAQNVDQVYFVSQSCSANKTTANSAYEKNLKTLLSSLSSNATTTLFYNNTVLGSTNTTSDTVYGLFMCRGDIPLRLCKECVANATQKLSSDQSCSLSKQAVMWYAECIVRYSNVGFFSTVSTSPEYSLYNPNDITDNSTNSFMNFLSNTINQTAEAAANSAKRFSTKEANLSQSQTLYCLAQCTEDLPPQNCTTCLAQAIRELPICCYAKQGGRVGFPSCNVWYELYPFYGLITDQTPSPTSTPLPPPPSSSSSGKGQPRNIILILTSSITLPGILFTFYYYFIRRKAKKNNKTILRKNFGHETSTIESLQFNLAIIETATNNFSHENKIGKGGFGEVYKGILIDGRPIAVKRLSRNSKQGVEEFKNEVLLIAKLQHRNLVAFIGFCLDEQEKILIYEYVPNKSLDYFLFDTKLEKVLSWSDRHKIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDENMNPKISDFGLARIVEIDQQEGSTNRIIGTYGYMSPEYAMFGQFSDKSDVYSFGVMILEIISGKKNIGSYEPHRVADGLLNFVWRHWKDETPLNTLDPKLRDNYSNIEVIKCIRIGKQEKNKKEQMGSSGFSWKLADHPKLPKGKTVAVVVLDGWGEATPNEYNCIHKAETPCMDSLKKGAPERWRLVRAHGTAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIFEGEGFKYIKECFENGTLHLIGLLSDGGVHSRLDQLQLLLKGVSERGVKRVRVHILTDGRDVLDGSSVGFVETLENDLANLRAKGVDARIASGGGRMNVTMDRYENDWSVVKRGWDAQVLGEAPYKFTNALEAVKKLRAEPKANDQYLPPFVIVDESGKPVGPIVDGDAVVTFNFRADRMTMIAKALEYENFDKFDRVRYPKIRYAGMLEYDGELKLPSHYLVSPPEIDRTSGEYLVYNGIRTFACSETVKFGHVTFFWNGNRSGYFNAELEEYVEIPSDSGITFNEQPLMKALQIAEKARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADAAVKMILDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPLLGKDGKIQILTSHTLEPVPIAIGGPGLAPGVRFRNNVPTGGLANVAATVMNLHGFEAPSDYETTLIEVVDN 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02029 1167 Gene3D Alkaline Phosphatase, subunit A 630 1154 IPR017850 -
Gma18g02029 1167 SUPERFAMILY Alkaline phosphatase-like 629 1156 IPR017850 -
Gma18g02029 1167 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02029 1167 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 609 1167 IPR005995 GO:0004619|GO:0006007
Gma18g02029 1167 ProSiteProfiles Gnk2-homologous domain profile. 32 140 IPR002902 -
Gma18g02029 1167 SUPERFAMILY 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain 704 939 IPR036646 GO:0004619|GO:0005737
Gma18g02029 1167 Gene3D - 704 948 IPR036646 GO:0004619|GO:0005737
Gma18g02029 1167 SUPERFAMILY Protein kinase-like (PK-like) 327 596 IPR011009 -
Gma18g02029 1167 Pfam Metalloenzyme superfamily 628 1153 IPR006124 GO:0003824|GO:0046872
Gma18g02029 1167 CDD STKc_IRAK 354 599 - -
Gma18g02029 1167 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 2-RELATED 609 1167 - -
Gma18g02029 1167 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Gma18g02029 1167 Gene3D Transferase(Phosphotransferase) domain 1 424 609 - -
Gma18g02029 1167 Gene3D Phosphorylase Kinase; domain 1 308 423 - -
Gma18g02029 1167 Pfam Protein tyrosine and serine/threonine kinase 351 559 IPR001245 GO:0004672|GO:0006468
Gma18g02029 1167 TIGRFAM pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 629 1158 IPR005995 GO:0004619|GO:0006007
Gma18g02029 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Gma18g02029 1167 Coils Coil 789 809 - -
Gma18g02029 1167 Gene3D - 31 140 IPR038408 -
Gma18g02029 1167 Gene3D - 146 253 IPR038408 -
Gma18g02029 1167 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Gma18g02029 1167 SMART serkin_6 348 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02029 1167 MobiDBLite consensus disorder prediction 262 281 - -
Gma18g02029 1167 Pfam BPG-independent PGAM N-terminus (iPGM_N) 710 930 IPR011258 GO:0004619|GO:0005737|GO:0006007|GO:0030145
Gma18g02029 1167 Pfam Salt stress response/antifungal 39 137 IPR002902 -
Gma18g02029 1167 Pfam Salt stress response/antifungal 162 251 IPR002902 -
Gma18g02029 1167 CDD iPGM 628 1162 IPR005995 GO:0004619|GO:0006007
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02029 Gma-Chr18 53589544 53616570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02029 14 599 Receptor kinase-like Gene Family AT4G05200 47.811 2.15e-176 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma18g02029 Metalloenzyme 1.1e-109 CL0088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02029 K15633 - gmx:100820155 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02029 18 53589544 53616570 Gma18g02029 18 53589544 53616570 ECH