Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02012 ATGCCGGCTCTGAGAATTCATGGATATGCCTTGGCTGTTTCGTTTTGTCTTATCACCTTCATAGCAGCCTCACTACCAACAGACCCTTCAGAAGTTGATGCCCTGATAGAGATCAAGAATAGTTTGATTGATCCTAAGAACAATCTTAAGAACTGGAATAAAGGAGATCCATGTGCAGCAAACTGGACTGGTGTTTGGTGTTTTGATCAGAAGGGGGATGATGGGTACTTCCATGTTCGTGAGATCTACTTAATGACAATGAATCTCTCGGGAAGTCTATCACCACAGCTTGGACAGCTATCCCATCTTGAGATACTGAATTTCATGTGGAACGACTTGACAGGCACAATACCAAAGGAGATTGGAAATATTAAATCATTGAAACTCTTGCTCCTGAATGGGAATAAGTTATCTGGTAGTTTACCGGATGAGCTTGGCAACCTTCCAAATTTGAATAGATTCCAAGTAGACGAAAACCAATTGTCAGGTCCTATACCAGAGTCATTTGCCAACATGACCAATATTAGACACCTTCACTTGAACAACAACTCATTTAGTGGTGAACTTCCATCCACACTGTCAAAGCTATCAAATCTTATACACTTGCTTGTGGACAACAATAATTTATCAGGCCATCTTCCACCAGAATACTCCATGTTAGATGAATTGGCAATACTCCAGCTTGATAACAACGATTTCAGTGGGAGTGAAATTCCTTCTACCTATGCAAACCTAACCAGGCTAGTGAAATTAAGTCTACGAAACTGTAGTCTGCAAGGAGCTATTCCTGATTTCAGTTCAATATCCAAGCTTACCTATTTAGATCTTAGCTGGAATCAGATCACTGGACCCATACCATCAAATAAAGTGGCAGACAATATGACAACTTTTGATCTGTCTAATAATCGTCTCAATGGATCCATTCCTCACTTCTTTTATCCTCATCTTCAAAAATTGTCACTTGCAAACAATTTACTGTCTGGGTCTATCCCTGGTAGCATATGGCAGAACATGTCCTTCAGTGCGAAAGATAAACTTACAATTGATCTCCAGAACAACTCATTTTCAGATGTTTTGGGAAACCTGACCCCCCCGGAAAATGTTACCTTGAGGCTTTCTGGTAATCCTATCTGCAAGAATTCTAACATACAAAGTATTGGTCAATATTGTGGACCTGAAGCAGATAATAAGGCAGCCCAAGATTCAACAAACTCAACTTTCTGTCCAGTTCAATCTTGTCCAGTGGATGACTTTTATGAATATGCCCCCTCTTCTCCAGTTCCCTGCTTTTGTGCAGCACCTCTGAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTGCTCCCTATAGAAGTAGTTTTGAAGACTATATAACTAGGTCCTTAGACTTAGATCTCTATCAACTATCAATAGATTCAGTTGCTTGGGAAGAGGGACCTCGTCTTAGAATGTATTTGAAACTCTTCCCTTCCTATAATGATTCCGGTTCTAGTATGTTCAATGAAAGTGAGGTCCATCGCATTAAAGGCATATATTCATCATGGCACTTTCCTCGCACTGATTTTTTTGGACCATATGAACTGCTGAACTTCACTCTTCTTGGACCTTATGCAAATTTAAATGTTGATTCAAAGAAGAAAAAGAATAATGTGGGCATAAAAATTTCTGCTGTGATAGCAGCTGTTGCTTGTGCTTTAGCAATATCTGCAATAATCATTCTCCTGATTTCTAAAAGAAATATGAAATACCAGAAGAAGATTTCCAGGAAACGAATGTCTACTAATGTATCTATCAAAATAGATGGCATGAAAGCATTTACTTACAAAGAACTGgctattgctaccaacaaatttaatatctcaactaaagttggccaaggaggttatgggaatgtctataaaggcattttatctgatgaaacttttgtggctgttaagagagcagaagaaggttccttacaaggacaaaaggagtttctgactgaaattgagcttttgtcaaggttacaccatcgaaatcttgtctcgctgattggatactgtaatgaaaaagaggaacagATGCTGGTTTATGAATTCATGCCCAATGGAACCCTTAGGGACTGGATATCTGGTAAAAGTAGAAAAACCAAGGGAAGCCTAAATTTTAGTATGAGGTTGAGAATTGCAATGGGAGCAGCCAAAGGCATACTGTATCTGCATACAGAGGCTAACCCTCCTATATTCCACAGAGATATTAAAGCCAGTAACATTCTTCTGGACTCCAAGTTTACAGCTAAAGTGGCCGATTTTGGATTGTCACGGCTTGTACCAGACTTATATGAAGAAGGAACTGGTCCTAAATATGTGTCAACAGTTGTGAAAGGAACTCCAGGTTATCTAGACCCAGAATATTTGTTGACTCATAAGCTGACTGACAAATGTGATGTCTATAGCCTGGGAATTGTGTATCTGGAGCTTTTGACAGGCATGCAACCAATATCACATGGGAAAAACATTGTCCGCGAGgttaatacggctcgtcaatctggtacaatatattccataatagacagcagaatggggttatatccatctgattgtttggacaagtttttaactctggccctcagatgttgccaagacaatccagaggagagaccatcaatgctagatgtggtgagagaactggaagatatcattacaatgttgcctgaacctgaaactcttttctcagatgttagcttactcaattctggtaacatagcacccccatcatctgcaacaacatcaacatcaaatgtgacaagggaggagcaacacatgtcctcatatgtttcaggaagtgatcttgtcagtgatgtcattcccaccgttgttcctcgctga 2874 0.3142 MPALRIHGYALAVSFCLITFIAASLPTDPSEVDALIEIKNSLIDPKNNLKNWNKGDPCAANWTGVWCFDQKGDDGYFHVREIYLMTMNLSGSLSPQLGQLSHLEILNFMWNDLTGTIPKEIGNIKSLKLLLLNGNKLSGSLPDELGNLPNLNRFQVDENQLSGPIPESFANMTNIRHLHLNNNSFSGELPSTLSKLSNLIHLLVDNNNLSGHLPPEYSMLDELAILQLDNNDFSGSEIPSTYANLTRLVKLSLRNCSLQGAIPDFSSISKLTYLDLSWNQITGPIPSNKVADNMTTFDLSNNRLNGSIPHFFYPHLQKLSLANNLLSGSIPGSIWQNMSFSAKDKLTIDLQNNSFSDVLGNLTPPENVTLRLSGNPICKNSNIQSIGQYCGPEADNKAAQDSTNSTFCPVQSCPVDDFYEYAPSSPVPCFCAAPLRIGYRLKSPSFSYFAPYRSSFEDYITRSLDLDLYQLSIDSVAWEEGPRLRMYLKLFPSYNDSGSSMFNESEVHRIKGIYSSWHFPRTDFFGPYELLNFTLLGPYANLNVDSKKKKNNVGIKISAVIAAVACALAISAIIILLISKRNMKYQKKISRKRMSTNVSIKIDGMKAFTYKELAIATNKFNISTKVGQGGYGNVYKGILSDETFVAVKRAEEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEKEEQMLVYEFMPNGTLRDWISGKSRKTKGSLNFSMRLRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSRLVPDLYEEGTGPKYVSTVVKGTPGYLDPEYLLTHKLTDKCDVYSLGIVYLELLTGMQPISHGKNIVREVNTARQSGTIYSIIDSRMGLYPSDCLDKFLTLALRCCQDNPEERPSMLDVVRELEDIITMLPEPETLFSDVSLLNSGNIAPPSSATTSTSNVTREEQHMSSYVSGSDLVSDVIPTVVPR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02012 957 SUPERFAMILY L domain-like 44 385 - -
Gma18g02012 957 SMART serkin_6 620 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02012 957 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Gma18g02012 957 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 928 - -
Gma18g02012 957 Gene3D Phosphorylase Kinase; domain 1 590 695 - -
Gma18g02012 957 ProSiteProfiles Protein kinase domain profile. 620 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02012 957 Gene3D Transferase(Phosphotransferase) domain 1 696 903 - -
Gma18g02012 957 Pfam Protein kinase domain 621 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02012 957 SUPERFAMILY Protein kinase-like (PK-like) 605 914 IPR011009 -
Gma18g02012 957 CDD STKc_IRAK 626 895 - -
Gma18g02012 957 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 928 - -
Gma18g02012 957 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Gma18g02012 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Gma18g02012 957 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Gma18g02012 957 Gene3D Ribonuclease Inhibitor 191 293 IPR032675 -
Gma18g02012 957 Gene3D Ribonuclease Inhibitor 294 399 IPR032675 -
Gma18g02012 957 MobiDBLite consensus disorder prediction 917 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02012 Gma-Chr18 53423186 53433292 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02012 5 904 Receptor kinase-like Gene Family AT5G01950 61.080 0.0 1102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma18g02012 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02012 - - gmx:100815005 1861.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02012 18 53423186 53433292 Gma18g02012 18 53423186 53433292 ECH
Gma18g02012 18 53423186 53433292 Gma09g02486 09 50198759 50208284 GST