Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02004 ATGATGCTACAGTCCTACTTTACCACAATACCAATTTTCCTACTCCTGCTTGTGTTTACTCGAACTAAAGCTGATCTACAGTCAGAAAAGCAAGCCCTCCTTGATTTTGCTGCTGCACTTCATCATGGTCCAAAGGTCAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGTGGGAGTTACATGCAGTCATGATGGCTCTCATGTGCTTTCTGTGAGGCTTCCAGGTGTCGGATTGCGTGGTTTTCTCCCACCAAGAACACTTGGTAAGCTTAATGGCCTCATTAGTCTCAGTCTTAGGTCCAACAGCTTGAGGGGGAACCTTCCAACTGACCTACTTTCCCTTCCTTCCCTGCGCTTTGTATATCTCCAACACAACAACTTCTCAGGTGTTATTCCTGATTCTCTGCCACCACGGCTTATCTTTCTTGATTTGTCCCATAACTCTTTTACAGGACAAATTCCAGCCTCAATCCAAAACTTGACACATCTGATAGGATTTAACCTCCAAAACAACTCTCTCACAGGACCTATTCCTGATGTTAACCTTCCTAGCCTTAAGGATTTGGATTTGAGCTTCAACTACTTGAATGGATCTATTCCTTCAGGTCTCCATAAGTTTCCTGCCTCCTCATTTAGAGGGAATTTGATGTTATGTGGAGCACCTTTGAAACAATGTTCTTCAGTTTCCCCTAATACCACATTGTCTCCACCAACAGTCTCTCAAAGACCAAGTGATCTATCAAACAGGAAAATGAGCAAGGGAGCAAAAATAGCAATAGTTTTGGGGGGTGTCACATTGCTGTTTCTTCCAGGTCTCTTAGTAGTGTTCTTCTGTTTCAAGAAAAAAGTTGGTGAACAAAATGTAGCACCTAAAGAGAAAGGTCAGAAGCTTAAGGAGGACTTTGGGAGTGGTGTGCAAGAGCCCGAGAGAAACAAGCTTGTATTCTTTGAAGGTTGTTCTTATAATTTTGATCTGGAGGACTTGTTAAGAGCTTCAGCTGAAGTCCTTGGGAAGGGAAGTGCTGGAACAACATACAAAGCCATCTTGGAGGATGGAACAACAGTAGTTGTGAAGAGGTTAAGAGAAGTGGCAATGGGAAAAAAAGAATTTGAACAGCAAATGGAGATTGTCCAAAGACTTGATCATCACCCAAATGTGATTCCCCTTCGTGCTTACTACTATTCCAAAGATGAAAAACTAATGGTTTATGACTACTCAACAGCCGGCAGTTTTTCCAAGTTATTGCATGGAACAACGGAAACTGGACGAGCTCCTCTAGATTGGCATACAAGATTGAAGATCATAGTTGGAGCTGCTAGGGGCCTTGCTCATATCCACTCAGCCAATGGAAAGAAACTTGTCCATGGCAATATAAAATCATCTAATGTGATTCTCTCAATAGATCTTCAAGGCTGCATATCAGATTTTGGCCTAACTCCCCTAACAAATTTCTGTGGTTCCTCCAGAAGTCCAGGCtatggatcacctgaagttatcgaatcacgaaaatcaactcaaaaatctgatgtgtacagctttggtgttctcctccttgagatgctgactggCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGTGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTATCCGAACATTGAAGATGAACTTGTGCAGATGCTGCAACTGGCAATGGCATGCGTGGCAGTGATGCCGGACGTGAGACCTTCAATGGAGGAAGTTGTCAGGACAATTGAAGAACTTAGAGCATCCATTTATTAA 1824 0.4068 MMLQSYFTTIPIFLLLLVFTRTKADLQSEKQALLDFAAALHHGPKVNWNSSTSICTSWVGVTCSHDGSHVLSVRLPGVGLRGFLPPRTLGKLNGLISLSLRSNSLRGNLPTDLLSLPSLRFVYLQHNNFSGVIPDSLPPRLIFLDLSHNSFTGQIPASIQNLTHLIGFNLQNNSLTGPIPDVNLPSLKDLDLSFNYLNGSIPSGLHKFPASSFRGNLMLCGAPLKQCSSVSPNTTLSPPTVSQRPSDLSNRKMSKGAKIAIVLGGVTLLFLPGLLVVFFCFKKKVGEQNVAPKEKGQKLKEDFGSGVQEPERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSAGTTYKAILEDGTTVVVKRLREVAMGKKEFEQQMEIVQRLDHHPNVIPLRAYYYSKDEKLMVYDYSTAGSFSKLLHGTTETGRAPLDWHTRLKIIVGAARGLAHIHSANGKKLVHGNIKSSNVILSIDLQGCISDFGLTPLTNFCGSSRSPGYGSPEVIESRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDEVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEDELVQMLQLAMACVAVMPDVRPSMEEVVRTIEELRASIY 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02004 607 Gene3D Ribonuclease Inhibitor 139 229 IPR032675 -
Gma18g02004 607 Gene3D Phosphorylase Kinase; domain 1 299 407 - -
Gma18g02004 607 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02004 607 ProSiteProfiles Protein kinase domain profile. 332 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02004 607 Gene3D Transferase(Phosphotransferase) domain 1 409 606 - -
Gma18g02004 607 SUPERFAMILY L domain-like 44 224 - -
Gma18g02004 607 SUPERFAMILY Protein kinase-like (PK-like) 336 599 IPR011009 -
Gma18g02004 607 PANTHER OS05G0588300 PROTEIN 10 605 - -
Gma18g02004 607 CDD STKc_IRAK 338 602 - -
Gma18g02004 607 Gene3D Ribonuclease Inhibitor 24 138 IPR032675 -
Gma18g02004 607 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Gma18g02004 607 MobiDBLite consensus disorder prediction 230 250 - -
Gma18g02004 607 PANTHER OS05G0480400 PROTEIN 10 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02004 Gma-Chr18 53314360 53317826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02004 12 605 Receptor kinase-like Gene Family AT5G58300 59.801 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma18g02004 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02004 - - gmx:100796675 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02004 18 53314360 53317826 Gma18g02004 18 53314360 53317826 ECH
Gma18g02004 18 53314360 53317826 Gma09g02492 09 50252442 50254918 GST