Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01972 ATGGCAAAACTTGGTTGTTCTAGTCGTAGGAAAGCAATTGAGGAGCTCCTTAGAGGGCGTGATTGTGCCAAACAACTTAGGAGTGTCATCAATGGGAGTTGTGAAGATGGATCATCAACAACCCCATCATTTGCTGAACAACTTGTGAAGGAGGTGCTCATGTCCTTCACCAACTCCCTCTCGTTCTTGAAGAACAACCCCACTTCTGAATCCCATGATGTTTCCAATGTTCAAGTTTGTGAATCTCCCAAGTCTGAGGACTCCCAAGAGAGCAATTGCAAGAGCTCCATCATTAAGGAACGTAGAGGGTGCTACAAGAGAAGAAGAACTGAACAAACATGGGAGAAGGAATCTGAAGCTCCAATTGATGACGGCCATCAGTGGAGAAAGTATGGCCAAAAGGAGATCCTGAGTGCCAAATTCCCAAGGAACTACTATAGATGCACTCACAAATTTGACCAAGGTTGCCAAGCAACAAAACAGGTGCAAAGAGTTCAAGAGGAACCAATCCTATACAAGACCACCTACTATGGCCTCCACACTTGCAAGAACTTGGCAAACCCTGAGATCATACTTGACCCTATGTCCCCTTCATCCTCATCCAAGTTCCTTAGCTTTGACAACTCCTTCCCAACCCCATCAAAGCAAGAGTGCCCCTTTCTCTCATCTTCTAATTTGCCATCATCAGTGAAAGGGGAGTGCAAGGAGGAGGTCCCTCCCTCAACTTCCTCCAATCATTATCTCATCTCTTCTGACCTCACTTTTGATAGCTCACCAAGGCATCATGTCACTCTATCATCAACACTTGACTCAGAGTACAAGAGTGTGGACATTTCGGATGTCTTGTATGATTCTGCTCAGCTTGATGATGCCTTTGAACCCTTCCTTGAATTTAGATGA 900 0.4511 MAKLGCSSRRKAIEELLRGRDCAKQLRSVINGSCEDGSSTTPSFAEQLVKEVLMSFTNSLSFLKNNPTSESHDVSNVQVCESPKSEDSQESNCKSSIIKERRGCYKRRRTEQTWEKESEAPIDDGHQWRKYGQKEILSAKFPRNYYRCTHKFDQGCQATKQVQRVQEEPILYKTTYYGLHTCKNLANPEIILDPMSPSSSSKFLSFDNSFPTPSKQECPFLSSSNLPSSVKGECKEEVPPSTSSNHYLISSDLTFDSSPRHHVTLSSTLDSEYKSVDISDVLYDSAQLDDAFEPFLEFR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01972 299 Pfam WRKY DNA -binding domain 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g01972 299 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g01972 299 Gene3D WRKY domain 101 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g01972 299 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 290 - -
Gma18g01972 299 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 290 IPR044810 GO:0003700
Gma18g01972 299 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g01972 299 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01972 Gma-Chr18 53003506 53005485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01972 7 208 WRKY Transcription Factor Family AT3G56400 38.288 1.28e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma18g01972 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01972 - - gmx:100170682 597.045