Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01952 ATGGCTACTACTTCTTTCTACATGACCATACCAATCTTCAAAATTCGCTTCTTCTTGTTCTTATGCTTTTTTGGGATAGGTTCTTCTCAATTGTCCTCTGATTTTTACTCCACAACGTGTCCCAATGCACTTTCAACCATTAAGAGCGTAGTGGACTCTGCTGTGAGCAATGAGGCTCGCATGGGAGCATCCCTCCTACGTCTCCATTTCCATGATTGCTTTGGATGTGATGCATCAGTGCTATTAAACGATACAACAAGTTTCACAGGTGAACAGACGGCACGTGGCAACGTTAATTCCATAAGGGGTTTTGGTGTAATAGACAACATCAAGTCTCAAGTTGAGAGCTTATGCCCTGGTGTTGTTTCTTGTGCTGATATTCTCGCTGTGGCTGCAAGGGACTCTGTTGTTGCTCTTGGTGGACCTAGTTGGACAGTGCAATTGGGCAGAAGAGACTCAACCACTGCAAGTTTAAGTTCTGCAAACTCAGACTTGCCCCGTTTTGATTTAAGTCTACAACAACTTAGCGATAATTTCCAAAACAAAGGTCTCACCACCGCAGAAATGGTTGCTCTGTCAGGAGGGCACACAATTGGGCAAGCTCAATGTTCAACTTTCAGAACAAGGATTTATAACGAGACCAACATAGATTCCTCTTTTGCAACATCATTGCAAGCAAATTGTCCAAGCGTGGGTGGTGACAGCAATTTGGCCCCTCTTGACAGCAGCCAAAACACCTTTGACAATGCTTACTTCAAGGATTTGCAGAGCCAAAAGGGTCTCTTGCACACTGATCAAGTGCTCTTCAATGGAGGATCCACTGACTCTCAAGTAAATGGTTATGCCAGCGACCCTTCAAGCTTCAACACTGACTTTGCCAATGCAATGATTAAAATGGGGAACATTAGCCCACTTACTGGCTCTAGTGGCGAAATCAGGACCAACTGTTGGAAAACCAATTAA 963 0.4413 MATTSFYMTIPIFKIRFFLFLCFFGIGSSQLSSDFYSTTCPNALSTIKSVVDSAVSNEARMGASLLRLHFHDCFGCDASVLLNDTTSFTGEQTARGNVNSIRGFGVIDNIKSQVESLCPGVVSCADILAVAARDSVVALGGPSWTVQLGRRDSTTASLSSANSDLPRFDLSLQQLSDNFQNKGLTTAEMVALSGGHTIGQAQCSTFRTRIYNETNIDSSFATSLQANCPSVGGDSNLAPLDSSQNTFDNAYFKDLQSQKGLLHTDQVLFNGGSTDSQVNGYASDPSSFNTDFANAMIKMGNISPLTGSSGEIRTNCWKTN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01952 320 PANTHER PEROXIDASE 72-RELATED 19 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gma18g01952 320 SUPERFAMILY Heme-dependent peroxidases 30 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 Gene3D Peroxidase, domain 2 166 299 - -
Gma18g01952 320 Gene3D - 34 316 - -
Gma18g01952 320 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 CDD secretory_peroxidase 30 319 IPR033905 GO:0004601|GO:0042744
Gma18g01952 320 Pfam Peroxidase 48 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 PANTHER PEROXIDASE 19 320 - -
Gma18g01952 320 ProSiteProfiles Plant heme peroxidase family profile. 30 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01952 320 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01952 Gma-Chr18 52757201 52759718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01952 29 320 Peroxidase AT5G05340 66.667 1.00e-141 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01952 K00430 - gmx:100800219 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01952 18 52757201 52759718 Gma18g01952 18 52757201 52759718 ECH
Gma18g01952 18 52757201 52759718 Gma11g01806 11 20633497 20638441 ECH
Gma18g01952 18 52757201 52759718 Gma18g00517 18 4856109 4860637 ECH
Gma18g01952 18 52757201 52759718 Gma09g02536 09 50648964 50651567 GST