Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01949 ATGGCTTCTACTTCTAGGGAGAAAAAAAGAGAGTCTCTGGAAGACACGTTGCAACAACTTCGCGATGTCACAAACTCCAGTGCTTTGAACAAAGCCTCAATTATTGTAGACGCCTCAAAATACATAGAGAAGTTGAAACAAAAAGTGGAGGGACTGAACTCAGAGCTGGGAATCGCGGATTCATCAACCTCTCAAATTGATGAACTGCCTATGGTAGTTGTGAAAACCCTAAAAAAGGGTTTCCTGATTAATGTGCTTTTAGAAAAGAATTTCCCTGGAATGCTCGTCTCTATACTCGAAACCTTCGAAGAACTGGGCCTTGATGTCCTTGATGCTAGGGTTTCTTGTGAAGACAGTTTCCAGCTAGAAGCTGTAGGAAGAGAAAGTCACAAGAACGACAGTGTTGACGCGCAAGTGGTAAAGCAAGCAGTGTTGCAAGCAATAAAGAACGTGGACTAA 459 0.427 MASTSREKKRESLEDTLQQLRDVTNSSALNKASIIVDASKYIEKLKQKVEGLNSELGIADSSTSQIDELPMVVVKTLKKGFLINVLLEKNFPGMLVSILETFEELGLDVLDARVSCEDSFQLEAVGRESHKNDSVDAQVVKQAVLQAIKNVD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01949 152 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 58 IPR036638 GO:0046983
Gma18g01949 152 Gene3D - 3 60 IPR036638 GO:0046983
Gma18g01949 152 ProSiteProfiles ACT domain profile. 83 152 IPR002912 -
Gma18g01949 152 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
Gma18g01949 152 CDD ACT_UUR-ACR-like 92 148 - -
Gma18g01949 152 Coils Coil 35 62 - -
Gma18g01949 152 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01949 Gma-Chr18 52703996 52705362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01949 - - gmx:100782382 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01949 18 52703996 52705362 Gma18g00205 18 1651755 1653216 ECH
Gma18g01949 18 52703996 52705362 Gma11g02370 11 39083596 39085073 ECH
Gma18g01949 18 52703996 52705362 Gma02g02448 02 50603940 50605465 ECH
Gma18g01949 18 52703996 52705362 Gma14g00453 14 4342475 4344045 ECH
Gma18g01949 18 52703996 52705362 Gma18g01949 18 52703996 52705362 ECH
Gma18g01949 18 52703996 52705362 Gma11g01817 11 20827860 20831725 ECH
Gma18g01949 18 52703996 52705362 Gma09g02539 09 50678845 50680890 GST