Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01920 ATGGGAGGCTGTTGCAGCCACGATGTTTCGGTTCGAGGGAAGGTGGAGAGCGAGATGGGTGATAGAGAATATGAGTATGAACATGAGAATGGTGTGTCTTTTGAACAAGGTGGAGCATTGGTAAGGTTAAGAGGTTCCTCTAGGTTTGTATCAATGTACGCACAACAGGGTCAGAAAGGTGTGAACCAAGATGCAATGACAGTTTGGGAGGACTATACTGGAGAAAAGGATGTGATCTTTTGTGGTGTGTTCGATGGTCATGGtcctctaggccacaaggtttcacaatttattcgtgacaatctaccctcaaaactgtctgcagcaatagaaatttcacagcagaagaccatcaaatactatgatgccaatgatgcagaaactggcagctttgatgatgcctacgatgacaataaccacaacatgtcccttgcttcatgggagggatgcttgctgaaatccttcgatgagatggatgagtaccttgctcaggaaattaacactgacagctattgcagtggttgcaccgctgtgacattaattaaacagggtggccagttgatagttggcaatttgggtgattctcgtgcagtactttgcacaagggatagggaccaactcattcctgttcaactcactgttgacttgaaaccagatattccaagtgaaacctcaagaattgttaactgtgaaggaagagtttttgcagcagaagaagaaccagatgtgtacagaatatggatgcctgatgatgactgccctggactagccatgtcaagagcctttggggacttttgcctcaaagattatggcctcatctcagttcctgatgtgttttacagaaaaattaccccacaagatgaatttgtggttttggcaactgatggggtgtgggatgtgctcactaacagtgaagtgataaacatagttgcttcagcaccaaggaggtccattgcagccaagttgttagtgaagcgtgctgttagagcctggagatacaagtatcctgAGGCCGGGGGGTGTGACAAGAAAGAGACGGGGTGTGGGAAGAGGCTGGGGTGTGGGGGTGGGGCAGGCCCTTGTTCCCTAGGCGCCTGGTGCAGGGTGCCACCGGTCGCGCCCAGCGGCAGGGCGCTACCAGACGCGCCCGCGTTAGGGGCACTACTCTGCTGCTCCCTAGTGCGCCGCGCCGTACCACGTATCGCGTACTCCATGGAAGCGCCAGTCTGA 1230 0.222 MGGCCSHDVSVRGKVESEMGDREYEYEHENGVSFEQGGALVRLRGSSRFVSMYAQQGQKGVNQDAMTVWEDYTGEKDVIFCGVFDGHGPLGHKVSQFIRDNLPSKLSAAIEISQQKTIKYYDANDAETGSFDDAYDDNNHNMSLASWEGCLLKSFDEMDEYLAQEINTDSYCSGCTAVTLIKQGGQLIVGNLGDSRAVLCTRDRDQLIPVQLTVDLKPDIPSETSRIVNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKITPQDEFVVLATDGVWDVLTNSEVINIVASAPRRSIAAKLLVKRAVRAWRYKYPEAGGCDKKETGCGKRLGCGGGAGPCSLGAWCRVPPVAPSGRALPDAPALGALLCCSLVRRAVPRIAYSMEAPV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01920 409 Pfam Protein phosphatase 2C 73 327 IPR001932 -
Gma18g01920 409 SUPERFAMILY PP2C-like 47 329 IPR036457 -
Gma18g01920 409 CDD PP2Cc 48 331 IPR001932 -
Gma18g01920 409 Gene3D - 44 343 IPR036457 -
Gma18g01920 409 PANTHER ALPHABET, ISOFORM E-RELATED 1 338 - -
Gma18g01920 409 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 338 - -
Gma18g01920 409 SMART PP2C_4 40 351 IPR001932 -
Gma18g01920 409 ProSiteProfiles PPM-type phosphatase domain profile. 49 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01920 Gma-Chr18 52267937 52273809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01920 1 336 PP2C-type Phosphatase Gene Family AT5G01700 52.632 2.59e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01920 - - gmx:100816587 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01920 18 52267937 52273809 Gma18g01920 18 52267937 52273809 ECH
Gma18g01920 18 52267937 52273809 Gma09g02564 09 50915322 50919238 GST
Gma18g01920 18 52267937 52273809 Gma01g01308 01 46096277 46098768 PCT
Gma01g01308 01 46096277 46098768 Gma18g01920 18 52267937 52273809 PCT