Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01892 ATGATGCAATCAGAGGATCTGCAATTCCAATGGCCATTCTTTGAAGACATGAACTCAACTTTTGATCAAGGTGTTGAGTCCTATGGCTTCACCACCATGTATGGCCACGTTGGTGATTGTGGACCTTATGACTTCACTATGAATGACCATGTTGGTGATTGTGGACTCAATACTCTATTGAGCACACCAGAGGATTCTACTTCTGAAATTTGTTCCATCCCCTTTCCTTCCTCCCCCATTTTCTCCATTGATCATATTCATATCCAATACCCAATCAATGAAGAAACCATGCACCTTCCATCACTCATGGAATTGGATGATTTTGATTCCATCTTGGATACTCAAATTATTAGTATTCAAGGTCATGGAGAAAGTGAAGGGAGCTTCTTCCCTTCACAGAATTTCTCGAGTGAGGTGGAAAATGCATGGAGTCCAACCCCATCTGTGAGGTCAGAGTTGTCCACAAATCAAACATCACCATTGACTTTACCACTAGAAAACATGGAAGTCGAAAACCAAGTGAGTCTTCCACACTTGTTGAAGGCCTATGGAGAAGCCTTGGAGCAAGGACAAAAAGCACTAGAAGAAGTGATTTTGAGGTGCATAAGCCAGAAAGCTAGCCCACTTGGTGAGTCTCTAGAGCGCCTTGCATTCTACTTGTCTCAAGGCATGACAAATCATGGAGACTATCTAAAAGGGGAGGCCTTAAAGAACTTTGAGGCTGCTTTGAGGGCATTATATCAAGGATTCCCAATTGGGAAAATTGCTCACTTTGCAGCTGTTTCAGCAATTCTCGAAGCCTTGCCACAAGATTGTGATGTGCACATAGTGGACTTTTATATTGGACATGGTGTTCAATGGCCTCCAATGATTGAGGCTATTGCACACATGAACAAAACATTGACATTGACATCAATCAAATGGGGTGGTGAGGTTCCTGAATGTGTTTCTAGTCCATGCAATTTTGAGGAAACTAGAAGGCAGCTCTATGAGCATGCCAAATCCTGTGGGTTGAAGTTGAAGGTTGAGGAGAAAGGAGTGGAGGAATTGGTTAGTGATATTAAGAAAATGAACAAAAAGGGTGAGAAGGGAGAGTTTTTGGCCTTCAATTGCACGATTGATCTGCCTCATATGGGAAAAGTAAGGAGCAGAAAACATGCCTTACAGTTTCTAAGGGTAGCTGATGAATTGATAAGCACCTCTGACAACAGGGGAATTATCACTTTTGCGGATGGGGATGCTTTTGAGAAAGTGAAAAATAACTTGAATTTCAGGTCATTTTTTGATGGGCACTTGGTGCATTACCAAGCCTTGTTAGAATCAATGGAATCACATTTCCCAACCAGTTTCTCAGAAGCAAGAATTGCCATGGAGAAATTATTTTTGCAACCTTGCATCTCTTCTCTTGATTGGTTACAAACATGGGAGGAGATGAAAAGGGGAGGCCATCTTGAGGAAGAAACTAGCTTAGAGGGTTGCCAATTGAGCAAAAATATCTTAATGGAAATTAGAGAAGTGTTGAGAGGAAGTGATGGTTCCTATCAGGCCAGGATTGAAGGACAACATGACAATGAACTAGTTTTGGAGTACAAAGGAACTCAACTATTAAGATTTTCAACTTGGAAAAACTAA 1632 0.4136 MMQSEDLQFQWPFFEDMNSTFDQGVESYGFTTMYGHVGDCGPYDFTMNDHVGDCGLNTLLSTPEDSTSEICSIPFPSSPIFSIDHIHIQYPINEETMHLPSLMELDDFDSILDTQIISIQGHGESEGSFFPSQNFSSEVENAWSPTPSVRSELSTNQTSPLTLPLENMEVENQVSLPHLLKAYGEALEQGQKALEEVILRCISQKASPLGESLERLAFYLSQGMTNHGDYLKGEALKNFEAALRALYQGFPIGKIAHFAAVSAILEALPQDCDVHIVDFYIGHGVQWPPMIEAIAHMNKTLTLTSIKWGGEVPECVSSPCNFEETRRQLYEHAKSCGLKLKVEEKGVEELVSDIKKMNKKGEKGEFLAFNCTIDLPHMGKVRSRKHALQFLRVADELISTSDNRGIITFADGDAFEKVKNNLNFRSFFDGHLVHYQALLESMESHFPTSFSEARIAMEKLFLQPCISSLDWLQTWEEMKRGGHLEEETSLEGCQLSKNILMEIREVLRGSDGSYQARIEGQHDNELVLEYKGTQLLRFSTWKN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01892 543 ProSiteProfiles GRAS family profile. 167 542 IPR005202 -
Gma18g01892 543 Pfam GRAS domain family 178 542 IPR005202 -
Gma18g01892 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 39 542 IPR005202 -
Gma18g01892 543 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 39 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01892 Gma-Chr18 51890927 51892772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01892 177 542 GRAS Transcription Factor Family AT5G66770 24.611 1.67e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma18g01892 GRAS 1.8e-37 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01892 - - gmx:100784347 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01892 18 51890927 51892772 Gma18g01892 18 51890927 51892772 ECH
Gma18g01892 18 51890927 51892772 Gma07g01430 07 19345000 19346873 GST