Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01891 ATGCCTATTCCTCTTATGGCTTCTCCAACTCTTCTTGTCTTCCTCCTATTTCTCTCTCTCTTACACCAAGTTGCCTCCAAGGCTGTGATCTTTGAAGGATTCGATGAAAACAGTGAACTCAATCTTCAAGGATCTTCCATCATCAAAACCAGCCGTTTGCTTAAACTCACCAACAGATCAACCAATATTGTAGGCCATGCATTCTATGCCACACCCTTCCAAATGCTTAACAAAAACAACACAAACCCTCCGCTCCAACCCTATGCTTATTCCTTCAGCACCAATTTTGTTTTTTCAATTGTGTCCCCAATTTCTGGCTCTGGTGGCTTTGGCCTTGCCTTCACCATAGCACCCTCAACACAGTTTCCTGGGGCTGAGGCTGGCCATTATCTTGGTCTTGTCAACTCCGCCAATGATGGGAATGACTCAAACCACATTTTTGCAGTTGAATTTGACACAGTAAATGGTTACAAAGATGACTCAGACACTGAAGGAAACCATGTTGGGGTCAACATCAATGGCATGGACTCAATCATTACTGAACCAGCTGCATACATTGAAGAGGGCACTGATAATGTAAAGGAAGATTTCAGAATGGCTAAGGTTGATGCTGTCCAAGTTTGGATAGAATATGATGGTGAAAAGAAAACTCTGAATGTAACAATAGCTCCTTTGCCATTACCAAGGCCAAGCAAACCAATTATAATGAACCATAACATTGATCTCTACAATGTTATGGAAGAAAGCATGTATGTTGGTTTCTCAGCATCAACAGGCCAAGAAACAAGCTCTCACTATCTTCTAGGATGGAGTTTTGTAGTGAATGGTGTTGCCCCTCTACTGAACATTTCCAACCTTCCAAAGCCACCACCAAAGGAGAAAGAACCAACCTCATTTCCTTGGGTCAATGTTGCAATTGGCATCTTGTCTGgaaAGGCTTGTGCAAACACAGATGTGTATTCATTTGGGGTTGTGCTCCTTGAAGTGGCCACAGGTAAGAGGCCTCTTGATTCGGATCAGTTTTTCTTGGTGGAGTGGGTTATTGAGAATTACCATTTGGGTCAAATTCTTGAGGTGGTTGATCCTAAGCTTGATTCACTTTATGATGAGGAAGAAGTTGAGTTGGTTCTGAAATTGGGTCTACTTTGCACTCAACATAGAGCAGATTATAGACCTTCCATGAAACAAGTCACAAGGTACTTGAACTTTGATGACCCTCTTCCTGATATTGCTGATTGGGGACATGATGTTTCTGGCAGCAGTAGATTGAGTGAAGGTTTCTTAGAAGTCACGTCTTCTATGGGAACTGTTGAAACATTAGGGTATTTGTCTTCCATTAGCATGAGTACTAAGTCCATAGATGCTGGTAGATAG 1374 0.4207 MPIPLMASPTLLVFLLFLSLLHQVASKAVIFEGFDENSELNLQGSSIIKTSRLLKLTNRSTNIVGHAFYATPFQMLNKNNTNPPLQPYAYSFSTNFVFSIVSPISGSGGFGLAFTIAPSTQFPGAEAGHYLGLVNSANDGNDSNHIFAVEFDTVNGYKDDSDTEGNHVGVNINGMDSIITEPAAYIEEGTDNVKEDFRMAKVDAVQVWIEYDGEKKTLNVTIAPLPLPRPSKPIIMNHNIDLYNVMEESMYVGFSASTGQETSSHYLLGWSFVVNGVAPLLNISNLPKPPPKEKEPTSFPWVNVAIGILSGKACANTDVYSFGVVLLEVATGKRPLDSDQFFLVEWVIENYHLGQILEVVDPKLDSLYDEEEVELVLKLGLLCTQHRADYRPSMKQVTRYLNFDDPLPDIADWGHDVSGSSRLSEGFLEVTSSMGTVETLGYLSSISMSTKSIDAGR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01891 457 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 310 447 - -
Gma18g01891 457 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 11 304 - -
Gma18g01891 457 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 292 IPR013320 -
Gma18g01891 457 CDD lectin_legume_LecRK_Arcelin_ConA 30 276 IPR001220 GO:0030246
Gma18g01891 457 SUPERFAMILY Protein kinase-like (PK-like) 312 405 IPR011009 -
Gma18g01891 457 Gene3D Transferase(Phosphotransferase) domain 1 296 411 - -
Gma18g01891 457 PANTHER - 310 447 - -
Gma18g01891 457 PANTHER - 11 304 - -
Gma18g01891 457 Gene3D - 29 276 - -
Gma18g01891 457 Pfam Legume lectin domain 30 287 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01891 Gma-Chr18 51868129 51870180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01891 310 422 Receptor kinase-like Gene Family AT3G08870 43.860 2.28e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma18g01891 Lectin_legB 5.7e-71 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01891 - - gmx:100802724 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01891 18 51868129 51870180 Gma18g01891 18 51868129 51870180 ECH