Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01890 ATGAGGATGGAAGAAGAGAGACATGGCTCATCGGAATGTTCTAAGACAAGCCCTTCTAACGAAGAAGATTGTGAAGAAAGTGAGGGCTATGAAGATGAAAGCAAGCAAAACAACAATAATGGAGGAAGCTCAAGCAACAGCACTGTGGAAGAGAACGAGAAGAAGACAACAGTGAGGCCCTATGTTAGATCCAAGATGCCAAGGCTACGTTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACCCCAAAGTTAGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGCCATCTACAGATGTACAGGAGCAAGAAGGTAGACACAAATCAAGTATTGGCTGATCCTAGGTTTCTTGTAGAAACTGGAGACAGAAATGTTTACAATCTTAGCCAACTTCCCATGCTTCAAGGCTATAATCCAAGCCAAAGTTCATCATACAGATATGGATATGGGGATGCTTCTCTCGCTATCTATGAAAACATGGTGCACAGGCCTTTCATGAATAGAAGTTCATTAGATGAATCTGGAGCTGAATTTTGTGGCAGCAGATTAACTGAGAGAATCCATGGGACCAATAGTAACATCAATTGGACTCGTAACATGttccaagttgattcttcttctagtttcaatgaaccatcaacaagcaaagtccaagaaccaaaacataagttcttctcatttggtggtaatgaatcctcatgcacacaaatcaaaatgagccaggttgatctacatcaatcaactcagctgcaaccaggtgcacaagagctcatgcctaataataagtttgcaacaaatgaggtggaactgaagaccttgaaaagaaaggcttcagatattgaccttgatttgaatctgtcacttaagttaaattcaagggtcaatgctgagaaccaaggaagcatggtggaccatgaagttgttgatagcaatctatcactttctttgtgttcacaatcctcctcctttagcagcaacaggttgaaaaactcacaagatcactctaaggagcaaggggaaattattagagccagtgctctggatctaactatatga 1110 0.2459 MRMEEERHGSSECSKTSPSNEEDCEESEGYEDESKQNNNNGGSSSNSTVEENEKKTTVRPYVRSKMPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDTNQVLADPRFLVETGDRNVYNLSQLPMLQGYNPSQSSSYRYGYGDASLAIYENMVHRPFMNRSSLDESGAEFCGSRLTERIHGTNSNINWTRNMFQVDSSSSFNEPSTSKVQEPKHKFFSFGGNESSCTQIKMSQVDLHQSTQLQPGAQELMPNNKFATNEVELKTLKRKASDIDLDLNLSLKLNSRVNAENQGSMVDHEVVDSNLSLSLCSQSSSFSSNRLKNSQDHSKEQGEIIRASALDLTI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01890 369 PANTHER - 8 369 - -
Gma18g01890 369 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 369 IPR044848 GO:0003700
Gma18g01890 369 Gene3D - 66 123 - -
Gma18g01890 369 MobiDBLite consensus disorder prediction 34 51 - -
Gma18g01890 369 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 67 122 IPR006447 GO:0003677
Gma18g01890 369 MobiDBLite consensus disorder prediction 1 22 - -
Gma18g01890 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 123 IPR017930 -
Gma18g01890 369 SUPERFAMILY Homeodomain-like 65 121 IPR009057 -
Gma18g01890 369 Pfam Myb-like DNA-binding domain 69 119 IPR001005 -
Gma18g01890 369 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01890 Gma-Chr18 51841741 51843799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01890 58 124 G2-like Transcription Factor Family AT2G42660 82.090 1.12e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma18g01890 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01890 - - gsj:114395715 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01890 18 51841741 51843799 Gma18g01890 18 51841741 51843799 ECH
Gma18g01890 18 51841741 51843799 Gma07g01425 07 19280467 19284538 GST