Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01889 ATGGCCACACCCTTGGCCTACCAAGAGCACCTTCCGGCGGCACCCAGTTGGCTGAACAAAGGTGACAACGCATGGCAGTTAACAGCAGCCACCCTCGTTGGTCTTCAAAGCATGCCGGGTCTCGTGATCCTCTACGCAAGCATAGTGAAGAAGAAATGGGCAGTGAATTCAGCTTTCATGGCTCTCTATGCCTTTGCAGCAGTTCTAATATGTTGGGTGCTTGTGTGTTACCGCATGGCCTTTGGAGAAGAACTTTTACCCTTCTGGGGTAAGGGTGCTCCAGCACTAGGCCAGAAGTTCCTCACAAAACGAGCCGTAGTCAATGAAACCATCCACCACTTTCATAATGGCACTGTTGAATCCCCTCCAGAAGAACCCTTTTACCCTATGGCCTCACTTGTGTATTTCCAATTCACTTTTGCTGCTATTACCCTTATTTTGTTGGCTGGCTCTGTCCTCGGCCGAATGAACATCAAGGCTTGGATGGCTTTTGTGCCTCTTTGGTTGATCTTTTCCTACACTGTTGGGGCTTTTAGTCTTTGGGGTGGTGGCTTTCTCTACCAATGGGGGGTTATTGACTATTCTGGCGGCTATGTCATCCACCTTTCTTCTGGAATCGCTGGTTTAACTGCTGCTTACTGGGTTGGACCAAGGTTGAAGAGTGACAGGGAGAGGTTTCCACCAAACAACGTGCTACTTATGCTTGCTGGTGCTGGGTTGTTGTGGATGGGGTGGTCAGGGTTCAACGGTGGAGCACCATATGCTGCAAACATTGCATCTTCAATTGCGGTGTTGAACACAAACATTTGTGCAGCCACTAGCCTCCTTGTGTGGACAACTTTGGATGTCATTTTCTTTGGGAAACCTTCGGTGATTGGAGCTGTGCAGGGCATGATGACTGGACTTGTATGCATCACCCCAGGAGCAGGGCTTGTGCAATCGTGGGCTGCTATACTGATGGGAATATTATCTGGGAGCATTCCATGGGTGACCATGATGATTTTGCATAAAAAGTCAACCTTGCTACAAAAGGTGGATGACACCCTTGGTGTGTTTCACACACATGCTGTGGCTGGCCTTTTGGGTGGTCTCCTCACAGGTCTATTAGCAGAACCAGCCCTTTGTAGACTACTATTGCCAGTTACCAACTCAAGGGGTGCATTCTATGGTGGTGGTGGTGGTATGCAGTTCTTCAAGCAATTGGTGGCGGCCATGTTTGTCATTGGATGGAACTTGGTGTCCACCACCATCATTCTCCTTGTCATAAAATTGTTCATACCCTTGAGGATGCCGGATGAGCAGCTGGAAATCGGCGACGACGCCGTCCACGGCGAGGAAGCTTATGCCCTCTGGGGTGATGGAGAAAAATATGACCCAACTAGGCATGGTTCCTTGCAAAGTGGCAACACTTTTGTGTCACCTTATGTTAATGGTGCAAGAGGGGTGACCATAAACTTATGA 1461 0.4901 MATPLAYQEHLPAAPSWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGEELLPFWGKGAPALGQKFLTKRAVVNETIHHFHNGTVESPPEEPFYPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIASSIAVLNTNICAATSLLVWTTLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAILMGILSGSIPWVTMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPALCRLLLPVTNSRGAFYGGGGGMQFFKQLVAAMFVIGWNLVSTTIILLVIKLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSLQSGNTFVSPYVNGARGVTINL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01889 486 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gma18g01889 486 TIGRFAM amt: ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma18g01889 486 Gene3D Ammonium transporter AmtB like domains 4 451 IPR029020 -
Gma18g01889 486 PANTHER AMMONIUM TRANSPORTER MEP2 1 483 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma18g01889 486 PANTHER AMMONIUM TRANSPORTER 1 483 - -
Gma18g01889 486 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gma18g01889 486 SUPERFAMILY Ammonium transporter 17 430 - -
Gma18g01889 486 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005887
Gma18g01889 486 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005887
Gma18g01889 486 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005887
Gma18g01889 486 PRINTS Rhesus blood group protein signature 356 372 IPR002229 GO:0005887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01889 Gma-Chr18 51816442 51821259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01889 130 486 Inorganic Solute Cotransporters AT2G38290 77.716 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01889 K03320 - gmx:100783281 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01889 18 51816442 51821259 Gma18g01889 18 51816442 51821259 ECH
Gma18g01889 18 51816442 51821259 Gma09g02574 09 51031501 51034222 GST