Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01882 ATGAGAATTCCCCATGTTTCATTGCTTTCCTTCATATTCTGCTACTGCTTCTGGATACACCACAGTGTTTACTACACTGGGGTTTCAGCCCAAATTGTTGAGGATCAACAACAATCATTGCTCAAACTGAAGAATAGCCTCAAATTCAAGACTAATAAGTCTACAAAACTTGTGTCTTGGAATCCAAGCGTAGATTTCTGTAAGTGGAGGGGTGTTGCCTGTGACGAGGAGAGGCAAGTTACAGGCCTTGACTTGAGTGGAGAATCTATCTATGGTGAATTTGACAATTCAAGTACTCTTTTCACTTTGCAAAATCTCCAGATACTGAATTTGTCTGATAATAACTTCAGTTCTGAGATACCATCCGGTTTCAACAAGTTGAAGAACTTAACATATCTGAATTTGTCTCATGCTGGCTTTGTGGGGCAGATTCCAACAGAGATTTCTTACCTGACAAGGTTGGTAACTCTTGATATCTCTTCTGTTTCCTATTTATATGGGCCACCACTGAAACTTGAAAACATAGATCTACAAATGCTTGTCCGAAACCTCACCATGCTTAGACAATTGTATATGGATGGTGTAATTGTAACAACTCAGGGAAATACATGGAGCAATGCTTTCTTTCAACTTGTTAACCTGCAGGAGCTGAGCATGTCAGACTGCAATCTCTCTGGACCCCTTGATCCTTCCTTGACAAGACTTCCGAATCTATCAGTCATTCGTCTTGATCAGAACAATTTCTCATCCCCAGTGCCAGAAACCTTTGCTAATTTTACAAATTTAACCACCCTTCACCTTAGTTCTTGTGAATTGACTGGAACATTTCCAGAGAAAATATTTCAGGTAGCAACATTGTCTGTTTTAGACTTATCATTCAATTATCATCTGTATGGATCTTTGCCTAAATTCCCACTGAATAGCCCTCTTCAGACATTGATTGTGAGTGGCACAAATTTCTCGGGAGCAATACCACCTTCTATAAATAATCTTGGGCAGTAA 1002 0.3952 MRIPHVSLLSFIFCYCFWIHHSVYYTGVSAQIVEDQQQSLLKLKNSLKFKTNKSTKLVSWNPSVDFCKWRGVACDEERQVTGLDLSGESIYGEFDNSSTLFTLQNLQILNLSDNNFSSEIPSGFNKLKNLTYLNLSHAGFVGQIPTEISYLTRLVTLDISSVSYLYGPPLKLENIDLQMLVRNLTMLRQLYMDGVIVTTQGNTWSNAFFQLVNLQELSMSDCNLSGPLDPSLTRLPNLSVIRLDQNNFSSPVPETFANFTNLTTLHLSSCELTGTFPEKIFQVATLSVLDLSFNYHLYGSLPKFPLNSPLQTLIVSGTNFSGAIPPSINNLGQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01882 333 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Gma18g01882 333 SMART LRR_typ_2 259 283 IPR003591 -
Gma18g01882 333 SMART LRR_typ_2 235 258 IPR003591 -
Gma18g01882 333 SMART LRR_typ_2 103 126 IPR003591 -
Gma18g01882 333 Pfam Leucine Rich repeats (2 copies) 104 144 IPR025875 -
Gma18g01882 333 Gene3D Ribonuclease Inhibitor 202 309 IPR032675 -
Gma18g01882 333 Gene3D Ribonuclease Inhibitor 32 201 IPR032675 -
Gma18g01882 333 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE 24 332 - -
Gma18g01882 333 SUPERFAMILY L domain-like 33 328 - -
Gma18g01882 333 Pfam Leucine rich repeat 236 294 IPR001611 GO:0005515
Gma18g01882 333 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 24 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01882 Gma-Chr18 51727250 51728251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01882 8 331 Receptor kinase-like Gene Family AT3G11080 31.579 8.58e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01882 - - gmx:121172708 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00702 03 22503381 22505537 Gma18g01882 18 51727250 51728251 PCT
Gma01g01359 01 47334683 47336332 Gma18g01882 18 51727250 51728251 PCT