Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01879 ATGTTGGAAAAATCCAATACCAATGGCGAAGATTCTATTAGTGAATTCGCAACCATTGGAAGGATACACCATGTGAATGTAGTTAGGCTTATTGGATATTGTGTTGAGGGACTAAAGCGCGCACTTGTTTATGAATTCATGCCCTTTGGCTCTCTTGACAAGTATATATTCCCTAAAGAAGAAAATATCCCCTTAAGTTATGATCAAATATATCAAATATCTCTTGGAGTAGCCCATGGGATTGCCTATTTGCATGAGGGGTGTGACATGCAAATTCTACATTTTGATATCAAGCCCTACAACATTCTTCTTGACGAAAACTTCGTCCCAAAAATTTCAGATTTTGTACTTGCAAAGCTGTATCCTGTAGATGATAGCATCATCCTTTGA 390 0.3744 MLEKSNTNGEDSISEFATIGRIHHVNVVRLIGYCVEGLKRALVYEFMPFGSLDKYIFPKEENIPLSYDQIYQISLGVAHGIAYLHEGCDMQILHFDIKPYNILLDENFVPKISDFVLAKLYPVDDSIIL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01879 129 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 128 - -
Gma18g01879 129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Gma18g01879 129 Pfam Protein kinase domain 7 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01879 129 SUPERFAMILY Protein kinase-like (PK-like) 12 126 IPR011009 -
Gma18g01879 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01879 129 SMART tyrkin_6 1 129 IPR020635 GO:0004713|GO:0006468
Gma18g01879 129 Gene3D Transferase(Phosphotransferase) domain 1 1 127 - -
Gma18g01879 129 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 128 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01879 Gma-Chr18 51686293 51686682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01879 1 128 Receptor kinase-like Gene Family AT1G66910 52.344 3.06e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma18g01879 Pkinase 1.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01879 - - ccaj:109815398 229.95