Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01878 ATGGCGCCAGAATTGTTCTATAGGAATATTGGAGTAGTCTCCTTCAAGGCTGAAGTTTACAGCTTTGGAATGTTGTTGATGGAAATGGCGTATAGACAGAAGAATGTGAATTCTCAAGCAGAAAACTCAAGCCAAGTTTTCTTTCCCACATGGATTTATGATCAATTTAATGAAGGAGAAGACATAGAATTGGATGATAGCAAAGAGGAGGAAAACAATATAGTAAAGAAGATGATCATAGTTGCACTTTACTGCATTCAATTAAAACCCTATTACCATCCTTCAATGAAAAAAGTAGTAGAGATGCTAGAAGAGGAACTTGATATCCTAGAAATGCCTCCAAAGCCTTTGTTGTATCCTATGAAACACCGATAG 375 0.3653 MAPELFYRNIGVVSFKAEVYSFGMLLMEMAYRQKNVNSQAENSSQVFFPTWIYDQFNEGEDIELDDSKEEENNIVKKMIIVALYCIQLKPYYHPSMKKVVEMLEEELDILEMPPKPLLYPMKHR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01878 124 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
Gma18g01878 124 PANTHER - 1 120 - -
Gma18g01878 124 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 120 IPR045874 GO:0004672
Gma18g01878 124 SUPERFAMILY Protein kinase-like (PK-like) 1 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01878 Gma-Chr18 51685892 51686266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01878 1 119 Receptor kinase-like Gene Family AT5G38280 43.902 1.24e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma18g01878 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01878 - - ccaj:109815398 198.749