Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01860 ATGGAGGGTCATCATCTCCATCACCGGCAACAACAATTACAACAACATCACCACCCTCATCACAACATCACAACTAGTAACGTGGATGCCACGGATAGGTTCCCCCAATGGAGCATCCAAGAGACCAAAGAGTTCCTCGTGATCCGTGCCGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAACAGCTTTGGGAAGTCATCTCCAACCGGATGAAGGAAAAGGGTTTCCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTACAAGGGATGTGAAACGATGGAGCCGGAAGCGATGAGGCAGCAATTCCCGTTCTACAACGAGCTTCAAGCGATTTTCGCGGCGAGAATGCAGAGAATGTTGTGGGCGGAAGCAGAAGGAGGGTCCAATAATAAGAAGAAGGGGATGCACCTTTCTTCCGACGACGAGGAAGAAGGCAATGAAGAGATGATGAGCGAGGGGGATCACAAGGGTAACATCATCATCAGCAAGAAGAACAAGAAGAAGGGAAAGATGGTAATTGGCGTCGGAGGGAGTGGTAACAACAACAATAATAGTAGTAGTAGTAGTAACAACTTGGAGAGTTTGAAGGAGATCATGGACGAGTTCATGAGGCAGCAGATGCAAATGGAGGCACAGTGGATGGAAGCCTTTGAGGCAAGGGAGAATGAGAGGAGGCTGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCGTTGGAGAATGAGAGGTTAATGATGGACCAAAGGTGGAGGGAGAGGGAAGAACAAAGAAGGATTAGGGAAGAAGTTAGGGCTGATAAGAGAGATGCTCTAATCACTGCTCTTCTTAACAAGCTCAGAAGAGAAGAGATGTAG 879 0.4812 MEGHHLHHRQQQLQQHHHPHHNITTSNVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGFHRSAEQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQAIFAARMQRMLWAEAEGGSNNKKKGMHLSSDDEEEGNEEMMSEGDHKGNIIISKKNKKKGKMVIGVGGSGNNNNNSSSSSNNLESLKEIMDEFMRQQMQMEAQWMEAFEARENERRLKEMEWRQTMEALENERLMMDQRWREREEQRRIREEVRADKRDALITALLNKLRREEM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01860 292 MobiDBLite consensus disorder prediction 136 161 - -
Gma18g01860 292 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 290 - -
Gma18g01860 292 Coils Coil 201 221 - -
Gma18g01860 292 CDD GT1 35 100 - -
Gma18g01860 292 ProSiteProfiles Myb-like domain profile. 37 93 IPR001005 -
Gma18g01860 292 Pfam Myb/SANT-like DNA-binding domain 36 120 IPR044822 -
Gma18g01860 292 Gene3D - 37 98 - -
Gma18g01860 292 MobiDBLite consensus disorder prediction 1 29 - -
Gma18g01860 292 PANTHER - 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01860 Gma-Chr18 51334451 51335745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01860 24 290 Trihelix Transcription Factor Family AT5G01380 51.546 8.51e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma18g01860 Myb_DNA-bind_4 2.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01860 - - gmx:100794230 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01860 18 51334451 51335745 Gma18g01860 18 51334451 51335745 ECH
Gma18g01860 18 51334451 51335745 Gma07g01396 07 18650943 18652609 GST