Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01854 ATGGGTTCCAAACAACGCCTACGTGGCTCTGCCACTGCCAAAGAACGCCTACGCTGGACACAAGAACTCCATGATCGTTTTGTGGAGGCTGTAAATAGACTTGGGGGCCCTGAGAGGGCAACACCAAAAGGTATATTGAAAGAAATGAAGGCTATGGGTGTTTCAGAATTAAACATATATCACGTCAAAAGCCATTTGCAGAAATACAGGATCTCCAAATTGATTCCAGAGTCCCCCACAAGAGGAAAGCTTGAGAAGAGAAGCATGTCAGATATACTGCCAAATTTTAGTTCTATAACTGCTCTTCAGCTAAAGGAAGTCCTTCAAATGCAGACAGGGATGCAAAATCGCCTGCGTGATAAAACAGAGGTTCAGAGAAGTTTGAAGCTAAAAATTGAAGCACAGGGAAAGTACTTCGAGAGAATTGGACAAAGTAATCATAGCAAAACAATCATTGGAAAGGCATGCAAGCCTTTTGCTTCGACAATTGCATCTCTGCCTTCACTTTTTGAGGAATCTGAATCCTTGAAAACTCAACCTGAGGAAGAGCATCAATCAGCCAAAAAGCAAAAGATTTCAGGAGAGGGTGTTTTTCCAACAAGTTTTGATCATGAATCATCCACCCCACCTGAATGCTACAACGAAACCTGGGATTTTTCTTGGAGTCAACTTGCAGCAGCATGCCAATCACCTTTGGTGCCCAGTTTCTTATGA 714 0.4272 MGSKQRLRGSATAKERLRWTQELHDRFVEAVNRLGGPERATPKGILKEMKAMGVSELNIYHVKSHLQKYRISKLIPESPTRGKLEKRSMSDILPNFSSITALQLKEVLQMQTGMQNRLRDKTEVQRSLKLKIEAQGKYFERIGQSNHSKTIIGKACKPFASTIASLPSLFEESESLKTQPEEEHQSAKKQKISGEGVFPTSFDHESSTPPECYNETWDFSWSQLAAACQSPLVPSFL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01854 237 Pfam Myb-like DNA-binding domain 17 70 IPR001005 -
Gma18g01854 237 Gene3D - 13 74 - -
Gma18g01854 237 MobiDBLite consensus disorder prediction 172 209 - -
Gma18g01854 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 194 IPR044848 GO:0003700
Gma18g01854 237 Pfam MYB-CC type transfactor, LHEQLE motif 103 142 IPR025756 -
Gma18g01854 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 74 IPR017930 -
Gma18g01854 237 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Gma18g01854 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 194 - -
Gma18g01854 237 MobiDBLite consensus disorder prediction 175 190 - -
Gma18g01854 237 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 72 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01854 Gma-Chr18 51189441 51193442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01854 10 155 G2-like Transcription Factor Family AT4G28610 47.368 2.56e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma18g01854 Myb_DNA-binding 3.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01854 - - gmx:100527384 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01854 18 51189441 51193442 Gma18g01854 18 51189441 51193442 ECH
Gma18g01854 18 51189441 51193442 Gma07g01393 07 18497034 18499505 GST