Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01844 ATGGGTTCTCACCAGCAAGAACCATGGCTATTGGAGAATGGGAAACCGAGGGTGTTGACCAAGGAGAATAGGCATGGCCGTTCTGCACACAGCATGTCCTCCACGTCTTTGCGCAAGAAGTCTAGCCGAACTCTTGTCTCCAAGCTTCCATGTGCCACACTCAGAAGCATCCTTTTAAATTTGCAAGAGGTTATTCTTGGTACCAAGCTTTCCATTCTCATCCCTGCCATTCCAGCTGCCATCATTGCCGAGTGCTATGGCTTTGGAAGACCTTGGATTTTTATATTGAGCTTACTTGGACTTACACCACTTGCTGAACGTGTGAGCTTCATCACAGAACAAGTTGCCTTTTACACTGGTCCCACAGTCGGAGGACTTCTGAATGCTACATGTGGGAATGTTACTGAGCTCATAATAGCAATATTTGCCCTTAGCAGTAACAAAATTGCTGTGGTCAAGTATTCTCTGTTGGGTTCTATTCTTTCAAACCTTCTTCTGGTTCTTGGGACCTCTCTATTATGTGGTGGCATTGCAAACCTTAAAGTGGAACAAAAATATGACAGAAGACAAGCAGATGTGAACTCACTTATGCTGTTGTTGGGATTGTTGTGCTACTTGCTTCCAATGCTGTTCAAATACAGTGGTGCCTCAGCTGCTCTCACTGTAGACCCTTCACTCCACTTGTCAAGAGCTTCTAGCATTGTGATGTTGATTGCATATGTAGTCTACATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATGGAGTGGCATTGCTTGGTTGGTAGGGATGACTGTGTTCATTGCTGTGTTGTCTGAATATGTGGTGGATACAATTGAGGATGCATCAGATTCGTGGGGTTTGTCTGTGAGCTTTCTCAGCATAATCTTGCTACCAATAGTTGGAAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATTTCATTGGGTGTTGCATTGGGTTCAGCAACTCAGATTGCCATGTTTGTGGTCCCATTATGTGTAATCGTTGCTTGGATAATGGGTATCGATATGGACCTGAACTTCAACCTCCTAGAGACAGGTTCCCTTGCGTTGGCAATAATAGTCACAGGCTTCACTTTACAGGATGGGACTTCTCACTACATGAAAGGCCTTGTTCTCCTGCTGTGCTACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAATCAAGCTGATCGCTTAATTAGTAGGCTTTGGCCTATTTGTTGTCCCTTCCTAAGATGA 1347 0.4432 MGSHQQEPWLLENGKPRVLTKENRHGRSAHSMSSTSLRKKSSRTLVSKLPCATLRSILLNLQEVILGTKLSILIPAIPAAIIAECYGFGRPWIFILSLLGLTPLAERVSFITEQVAFYTGPTVGGLLNATCGNVTELIIAIFALSSNKIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLKVEQKYDRRQADVNSLMLLLGLLCYLLPMLFKYSGASAALTVDPSLHLSRASSIVMLIAYVVYIVFQLWTHRQLFEAEDEGEDGEDGEEEQAVIGLWSGIAWLVGMTVFIAVLSEYVVDTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFVVPLCVIVAWIMGIDMDLNFNLLETGSLALAIIVTGFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPFNNQADRLISRLWPICCPFLR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01844 448 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 2 433 - -
Gma18g01844 448 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 2 433 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma18g01844 448 TIGRFAM cax: calcium/proton exchanger 74 422 IPR004798 GO:0006816|GO:0015369
Gma18g01844 448 Pfam Sodium/calcium exchanger protein 280 417 IPR004837 GO:0016021|GO:0055085
Gma18g01844 448 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016021|GO:0055085
Gma18g01844 448 MobiDBLite consensus disorder prediction 22 41 - -
Gma18g01844 448 Gene3D - 121 276 IPR044880 -
Gma18g01844 448 TIGRFAM caca2: calcium/proton exchanger 56 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01844 Gma-Chr18 51028488 51032123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01844 7 427 Antiporters AT2G38170 70.930 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01844 K07300 - gmx:100816231 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01844 18 51028488 51032123 Gma18g01844 18 51028488 51032123 ECH
Gma18g01844 18 51028488 51032123 Gma07g01383 07 18311696 18315991 GST
Gma18g01844 18 51028488 51032123 Gma03g00467 03 8333226 8337310 PCT
Gma03g00467 03 8333226 8337310 Gma18g01844 18 51028488 51032123 PCT