Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01843 ATGTTGGCGAAACCCATCTCTCCTCGAAGCTGTGATGTCTTAAATGGTTTTGTTAAGAGTAGTGCCACTTTTGTGATCACGGATGATCGGAAACTTGTGCCAGACTCAACAAGAAGCAGCAACAGCAGCAACGTGAGTTCACTTCCTTCCAACAGCTTCACCATCACCGACCCCTCCATCCCGGGACACCCCATCGTCTTCGCCAACCCAAGCTTCCTCAAGCTCACGGGCTACTCCCTCCGCGAAGTCCTAGGCTGGCCCGCAGCCATCTTCTCGGGCCCATTAACATCCCAAAAATTTGTAATCGAAATTCATGAAATCGTTAGAGAGGAGGGAAACGCGCAGGTCATTTTGCTCAACTACCACATAGATGATATGCCATTTTGGATGCTTTTTTGTGTTTCCCCTGTTTTCAGCAGTGACGGTGGCGCCGTCGTGCACTTTGTTGTTGTACAGGTGCATGTGGATGCCCGTTGGTCCCACCTCCTCAAGTTCGTTGTTTTCCCTATAATCAAGATTGTTGCTGATGGGGAAGAGGAGGATACTGGAGCTATGGTGAAGTCAACAACTCCCCATATGTTCTACAAGACTCTTAGAGCTTCAGACACCAGCACTCATGGTGGATTCTCACTTCCCCATCGAGCAGCTGAAGATTGTTTTCCTTCCCTGATAAGTATGAATTACGATGCATTGATTTTCGTCTAA 705 0.4823 MLAKPISPRSCDVLNGFVKSSATFVITDDRKLVPDSTRSSNSSNVSSLPSNSFTITDPSIPGHPIVFANPSFLKLTGYSLREVLGWPAAIFSGPLTSQKFVIEIHEIVREEGNAQVILLNYHIDDMPFWMLFCVSPVFSSDGGAVVHFVVVQVHVDARWSHLLKFVVFPIIKIVADGEEEDTGAMVKSTTPHMFYKTLRASDTSTHGGFSLPHRAAEDCFPSLISMNYDALIFV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01843 234 ProSiteProfiles PAS repeat profile. 65 85 IPR000014 -
Gma18g01843 234 SUPERFAMILY PYP-like sensor domain (PAS domain) 55 151 IPR035965 -
Gma18g01843 234 PANTHER PROTEIN TWIN LOV 1 50 156 - -
Gma18g01843 234 PANTHER PROTEIN TWIN LOV 1-LIKE 50 156 - -
Gma18g01843 234 CDD PAS 65 143 IPR000014 -
Gma18g01843 234 Pfam PAS domain 61 152 IPR000014 -
Gma18g01843 234 Gene3D - 174 230 IPR015300 -
Gma18g01843 234 Gene3D PAS domain 52 173 - -
Gma18g01843 234 SUPERFAMILY DNA-binding pseudobarrel domain 187 226 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01843 Gma-Chr18 51008310 51014245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01843 50 155 AGC Kinase Gene Family AT5G58140 34.906 3.45e-16 75.5