Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01841 ATGGCATGTCCAGCAATGGCAAATGGGAACGACTCATTGAACTTGAAGCCAAGTGAGACCAAGGGAAAGACCATCACTTGCAAAGCCGCGGTGGCATATGGTCCTGGAGAGCCCTTTGTGGTGGAAAATATTCTTGTTCATCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTACACTTCAATTTGTCACACCGATCTTAGCGCGTGGCGAGGCGTGAGCGAGGCTCAGCGTGCTTATCCTCGGATTTTGGGCCATGAAGCATCTGGGATTGTGGAGAGTGTGGGGGAAGGAGTGAGTGAAGTGAAGGAAGGGGACATAGTGGTGCCAATATTCAATGGGGAGTGTGGAGAGTGTACCTTGTGCAAGTGTGAGAAGACCAACAAGTGTGAGATATATGGGGTGAATCCCATGAAGAAGGTGATGGAAGGAGATGGCACAAGCAGATTCTCCACAGTTCATGGGAAACCCATTTTCCATTTCTTGAACACTTCGACTTTCTCGGAGTACACGGTGGTGGATTCGGCCTGTGTGGTGAAGTTTGTGAGCACAGACCACAGTCTCAGCATCAAGAACCTCACCTTGCTCAGTTGTGGTGTCTCCACAGGGGTTGGAGCTGCTTGGAATACAGCTAATGTGCATTCGGGTTCAACTGTAGCTGTTTTCGGCTTAGGAGCTGTTGGGCTCGCTGTGACTAGAGGTGCATCCAAAATAATAGGTGTAGACATCAACCCTGACAAATTCATCAAAGCTATGGGAGTGACAAACTTCATAAACCCCAAGGATGAAGAGAAGCCAGTATACGAGAGAATTAGAGAAATGACTGATGGAGGTGTACACTACAGTTTTGAATGTACTGGAAACGTGGACGTTCTTAGGGATGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACTGTAGTATTGGGAATTCATGCATCACCAACTTTGCTTCCCATCCACCCAATGGAGCTCTTCGATGGTCGCAACATTGTAGGATCTGTATTTGGAGGTTTCAAAGGGAGAAGTCACTTGCCTCATTTTGCGAAACAATGTGGACAAGGAGTGGTGAAGCTGGATAATTTCATCACTCACGAGCTACCTTTAGAGGAGATAGACAAAGCCTTTGATCTTTTGATCACTGGGAAGTCACTGAGATGTCTTCTGCACTTCTAA 1179 0.4724 MACPAMANGNDSLNLKPSETKGKTITCKAAVAYGPGEPFVVENILVHPPQKMEVRIKILYTSICHTDLSAWRGVSEAQRAYPRILGHEASGIVESVGEGVSEVKEGDIVVPIFNGECGECTLCKCEKTNKCEIYGVNPMKKVMEGDGTSRFSTVHGKPIFHFLNTSTFSEYTVVDSACVVKFVSTDHSLSIKNLTLLSCGVSTGVGAAWNTANVHSGSTVAVFGLGAVGLAVTRGASKIIGVDINPDKFIKAMGVTNFINPKDEEKPVYERIREMTDGGVHYSFECTGNVDVLRDAFLSAHEGWGLTVVLGIHASPTLLPIHPMELFDGRNIVGSVFGGFKGRSHLPHFAKQCGQGVVKLDNFITHELPLEEIDKAFDLLITGKSLRCLLHF 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01841 392 Gene3D - 30 387 - -
Gma18g01841 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 190 353 IPR036291 -
Gma18g01841 392 Pfam Zinc-binding dehydrogenase 224 339 IPR013149 -
Gma18g01841 392 SUPERFAMILY GroES-like 20 223 IPR011032 -
Gma18g01841 392 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 86 100 IPR002328 GO:0008270|GO:0016491
Gma18g01841 392 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 20 391 - -
Gma18g01841 392 Gene3D - 204 335 - -
Gma18g01841 392 Pfam Alcohol dehydrogenase GroES-like domain 53 181 IPR013154 -
Gma18g01841 392 SUPERFAMILY GroES-like 341 392 IPR011032 -
Gma18g01841 392 PANTHER ALCOHOL DEHYDROGENASE 20 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01841 Gma-Chr18 50979676 50985222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01841 53 334 Monolignol Biosynthesis Gene Families AT4G39330 27.304 1.99e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01841 K00001 - gmx:100815166 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01841 18 50979676 50985222 Gma07g01381 07 18275493 18282809 GST