Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01828 ATGACTGTTCACCTCCAATTGTTTCATCGAGATATATCAAGCAAGAATGTTATTATGGATTTGGAGTATGTGGCTCATGTCTCAGATTTTGGAACAGCCAAGCTTCTTAATCCTAATTCAACCAATTGGACCTCATTTGTTGGCACTTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTGAACCAAAAATGCGATGTGTATAGCTTTGGGGTATTAGCATTGGAAATACTTCTTGGAGAGCACCCTGGAGATTTTATAACTTCGTTGTTGACATGTTCATCAAATGCCATGGCGTCAACACTTGATATTCCTTCATTGATGGGTAAGTTAGACCAACGTCTCCCTTATCCTACAAATCAAATGGCTAAGGAGATAGCTTTGATTGCAAAGACAACAATTGCTTGCTTGACTGAAAGCCCTCATTCTCGTCTCACCATGGAGCAAGTTGCCAAGGAGCTTGGAATGTCAAAGTCATCTTCAGTGCATTAA 498 0.4036 MTVHLQLFHRDISSKNVIMDLEYVAHVSDFGTAKLLNPNSTNWTSFVGTFGYAAPELAYTMEVNQKCDVYSFGVLALEILLGEHPGDFITSLLTCSSNAMASTLDIPSLMGKLDQRLPYPTNQMAKEIALIAKTTIACLTESPHSRLTMEQVAKELGMSKSSSVH 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01828 165 Gene3D Transferase(Phosphotransferase) domain 1 2 164 - -
Gma18g01828 165 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 162 - -
Gma18g01828 165 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 162 - -
Gma18g01828 165 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01828 165 Pfam Protein kinase domain 6 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01828 165 ProSitePatterns Tyrosine protein kinases specific active-site signature. 7 19 IPR008266 GO:0004672|GO:0006468
Gma18g01828 165 SUPERFAMILY Protein kinase-like (PK-like) 6 156 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01828 Gma-Chr18 50764815 50765467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01828 7 156 Receptor kinase-like Gene Family AT1G75820 35.220 1.35e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma18g01828 Pkinase 2.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01828 - - gmx:100811066 296.204