Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01819 ATGCCTCCCTACGTCGTGCCTCCTCCCCTACGAGCCATGCCTCCTCATGCTGCGCCTCCACAACCACATCAGTGCCACCTCGAGTCCTTAACCTTGCAGGCCCCCACGATCACACCACCCTGCATCTTCTTCTCTCTTCATTCACTATTATTATATTTGAATTTGAGCCAAAATAATTTCAGGGATAGTATTCCACCTGAGTTTGGTAAATTAGAACATCTTCAGAGTCTTGATCGTAGCAAAAACTTTTTGGGTGGAACAATACCATCAATGCTTGGAGGGTTGAAACGCTTAGAAAGATTGAATTCCTCACACAATAATCTTTCAGACAATTTATCTAGCTTTGGTGATATGTTAAGCTTGATATTTGTTGATGTATCATATAACCAATTAAAGAGTTCACTTCCAAACATCCCAGCCTTCCGTATTGGTACAATTGAAACATTGAGAAATAATCAAGACTTGTGTGGAAATGTCTCTGGCTTGGAACCATGCCCAAAAGCAAGTAAAAAATCTCAAAATCATAAGACTAACAAAGTCATATTGGTATTTTTACCCGTTGGTTTGGGTACTTTAATATTGGCATTATTTGCCTTTGGAGTCTCATATCGTCTTTGTCGAAGCTCAAAGACAAAAGAACACCAGGATGCAAAACCACCAGGCCAAAATCTATTTTTGAAACCACATAAGAGTTTGACAATAAACATCTCATTGGAGTTGGAGGACAAGGAAGTTGAAATTCAAGCTTTGGTAGAAATTCGACATCATAACATTGTGAAGTTATATGGGTTTTGTTCTCATTCACAATTCTTATTTTTGGTGTATGAGTTATCGGAAAAGGGAAGCATGAATAAGATTTTAAAAGATAATGAACAAGCAATTGCATTCGATTGGAATTGGAGGATCAAAGCCAATAAAGGTGTAACAAGTGCTTTATGCTATATGCATCATGACTATTCAcctctgttagtgcttagcactactgagtttaaaaag 996 0.3665 MPPYVVPPPLRAMPPHAAPPQPHQCHLESLTLQAPTITPPCIFFSLHSLLLYLNLSQNNFRDSIPPEFGKLEHLQSLDRSKNFLGGTIPSMLGGLKRLERLNSSHNNLSDNLSSFGDMLSLIFVDVSYNQLKSSLPNIPAFRIGTIETLRNNQDLCGNVSGLEPCPKASKKSQNHKTNKVILVFLPVGLGTLILALFAFGVSYRLCRSSKTKEHQDAKPPGQNLFLKPHKSLTINISLELEDKEVEIQALVEIRHHNIVKLYGFCSHSQFLFLVYELSEKGSMNKILKDNEQAIAFDWNWRIKANKGVTSALCYMHHDYSPLLVLSTTEFKK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01819 332 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 221 324 - -
Gma18g01819 332 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 50 218 - -
Gma18g01819 332 Gene3D Transferase(Phosphotransferase) domain 1 199 324 - -
Gma18g01819 332 Gene3D Ribonuclease Inhibitor 21 166 IPR032675 -
Gma18g01819 332 Pfam Protein tyrosine and serine/threonine kinase 242 317 IPR001245 GO:0004672|GO:0006468
Gma18g01819 332 SUPERFAMILY Protein kinase-like (PK-like) 243 319 IPR011009 -
Gma18g01819 332 ProSiteProfiles Protein kinase domain profile. 181 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01819 332 SUPERFAMILY L domain-like 27 137 - -
Gma18g01819 332 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 50 218 - -
Gma18g01819 332 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 221 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01819 Gma-Chr18 50576623 50579528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01819 50 324 Receptor kinase-like Gene Family AT4G08850 36.585 4.39e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma18g01819 PK_Tyr_Ser-Thr 3.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01819 - - gmx:100811066 352.443