Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01817 ATGAAAGATTCTACTATGAAGAATTTGGCCATCACGGAGAAGAAGGTGCAGCAACATAAGCCTGGTGATTATGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAAACTTTACAAGAAGAAGCTCTTCTCGAAGAAGCTTTTTCCTCCCGATTTGATCCCTGTCATCAGTTTCTATCTATTTGTTGCTGATGTGTTCGTTAAGTTCACACGTCAGCATGCCACGTATATTACCACATGTGCTTAA 249 0.4016 MKDSTMKNLAITEKKVQQHKPGDYVGIFFQLIDWKRKLYKKKLFSKKLFPPDLIPVISFYLFVADVFVKFTRQHATYITTCA 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01817 82 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 8 52 - -
Gma18g01817 82 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 8 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01817 Gma-Chr18 50538025 50539146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01817 1 51 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 47.059 2.25e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01817 - - gmx:100813026 78.5666