Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01813 ATGAATAGGGGAATTGAAGTGCTCTCTCCAGCCTCCTATCTCCAAAACTCCAATTGGTTGTTCCAGGAAAGCAAGGAAGCAAGATGGACTGCAGAAGAGAACAAACTGTTTGAAAATGCCTTGGCTTACTATGATAAGGACACCCCAGATAGATGGATGAGGGTGGCAGCCATGATTCCAGGGAAAACTGTTGGTGATGTGATCAAACAGTACAGAGAGCTTGAGGAAGATGTGAGTGTCATTGAAGCAGGTTTGATCCCAGTTCCTGGCTATACTACTGCCAGTTCTTTCACATTGGAGTGGGTTAACAATCAAGGCTATGATGAGTTCAAGCAGTTCTGTAATGTTGGTGCGAAAAGGGGTGCATCCACGAGGCCAACTGAGCAGGAAAGGAAGAAAGGAGTGCCATGGACTGAAGAGGAGCACAGGCAATTTCTGCTGGGTCTCAAGAAGTATGGTAAAGGGGATTGGAGAAACATCTCTAGGAACTTTGTGACCACAAGGACACCAACTCAGGTTGCAAGTCATGCTCAGAAGTACTTCATCAGGCAGCTTACAGGAGGGAAGGATAAGAGAAGATCCAGTATCCATGACATCACAATGGTTAATCTCCAAGAAACAAAATCTCCTTCATCAGACACTACCAAACCCTCTTCTCCACTTCAGAATCAGGCATTGTCTAGCATGGTTAAGGAGGAATATGAGTGGAAATTGCCATGTGAGGGCATGCCCATTGTTTTCAATTCCACAAGTGGAAACATGTTCATGTCAGCACCACTGCATGGCATTTCTTCATATGAATCTAGACCACAGGAGCAAAATTTACTTAGACAATCTCCATGGATGCCAGTTTTCACCTTGTGA 864 0.4479 MNRGIEVLSPASYLQNSNWLFQESKEARWTAEENKLFENALAYYDKDTPDRWMRVAAMIPGKTVGDVIKQYRELEEDVSVIEAGLIPVPGYTTASSFTLEWVNNQGYDEFKQFCNVGAKRGASTRPTEQERKKGVPWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLQETKSPSSDTTKPSSPLQNQALSSMVKEEYEWKLPCEGMPIVFNSTSGNMFMSAPLHGISSYESRPQEQNLLRQSPWMPVFTL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01813 287 Gene3D - 21 88 - -
Gma18g01813 287 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Gma18g01813 287 ProSiteProfiles Myb-like domain profile. 21 75 IPR001005 -
Gma18g01813 287 MobiDBLite consensus disorder prediction 206 225 - -
Gma18g01813 287 SUPERFAMILY Homeodomain-like 28 82 IPR009057 -
Gma18g01813 287 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 258 IPR043363 -
Gma18g01813 287 SUPERFAMILY Homeodomain-like 130 184 IPR009057 -
Gma18g01813 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
Gma18g01813 287 CDD SANT 28 74 IPR001005 -
Gma18g01813 287 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Gma18g01813 287 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 132 184 IPR006447 GO:0003677
Gma18g01813 287 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Gma18g01813 287 Gene3D - 135 185 - -
Gma18g01813 287 SMART sant 25 77 IPR001005 -
Gma18g01813 287 SMART sant 133 183 IPR001005 -
Gma18g01813 287 CDD SANT 136 181 IPR001005 -
Gma18g01813 287 PANTHER TRANSCRIPTION FACTOR DIVARICATA 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01813 Gma-Chr18 50365264 50368004 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma18g01813 Myb_DNA-binding 3.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01813 - - gmx:100806787 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01813 18 50365264 50368004 Gma18g00282 18 2354988 2357044 ECH
Gma18g01813 18 50365264 50368004 Gma11g02292 11 38282740 38285188 ECH
Gma18g01813 18 50365264 50368004 Gma18g01813 18 50365264 50368004 ECH
Gma18g01813 18 50365264 50368004 Gma18g00613 18 6014645 6017075 ECH
Gma18g01813 18 50365264 50368004 Gma07g01344 07 17814718 17816114 GST