Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01812 ATGGACTCTTGGGTTAGAATGCTGTTTCTCATTGCTTGCATTGTTCCAGCTTTAGTCGAGTGCAAAGTGAGGCACTACAAATTCAATGTGGTACTGAAGAATACTACTAGGTTATGTTCAAGCAAACCAATTGTCACCGTTAATGGGAAATTTCCAGGACCCACTCTTTACGCTAGGGAAGATGATACAGTGCTAGTCAAAGTCAATAACCTTGTCAACCACAATGTCACCATCCACTGGCATGGTGTGAGACAACTTAGAACTGGTTGGGCTGATGGGCCTGCATACATCACACAGTGCCCAATTCTGTCAGGACAATCATATTTGTACAACTTCACCCTTACAGGACAAAGAGGAACACTTCTTTGGCATGCTCATGTTAACTGGCTAAGGTCAACTCTCCATGGTGCCATAGTTATCTTGCCAAAGAGGGGTGTGCCATACCCTTTCCCAAAACCAGATAAAGAGTTGGTTGTAATATTAGGAGAATGGTGGAAATCTGATACAGAAGATGTTATCAATGAAGCTCTCAAGTCAGGATTAGCACCAAATGTCTCAGATGCTCATACCATTAATGGCCTTCCAGGGATTGTGTCTGTGGCCAATTGTTCTACACAAGTAGATGTGTACAAGCTTCCTGTGGAAAGTGGCAAGACCTACCTATTGAGAATCATCAATGCTGCACTCAATGAGGAGCTCTTCTTCAAAATTGCTGGCCATCCATTCACTGTGGTTGAAGTTGATGCCTCATATGTAAAGCCCTTCAAGACAGACACTCTTTCGATAGCCCCTGGTCAAACCACCAATGCCCTTTTAACTGCTGACCAAAACTCTGGCAAATACACAATTGTAGCCTCTACTTTCATGGATTCTCCAGTTGTAGCTGTGGATAACTTGACTGCAACAGCCACATTGCACTACACTGGCACTCTTGCCACCACTCCTACACTTCTCACCACCCCTCCTCCAAGAAATGCCACCCAAGTTGCTAACAACTTCACCAATTCTCTCAAAAGCCTTAATTCTAAGAAATACCCAGCAAAAGTCCCACAAAAAGTTGATCATTCACTTCTCCTCACTGTTGGTTTGGGGATTAACCCTTGTCCATCTTGCACAGCTGGCAATGGGAGTAGAGTAGTGGCTGCTGTCAACAATGTGACATTTGTGATGCCAACCACTGCACTGCTTCAGGCTCATTACTTCAACATCAAGGGGGTGTTCACCACTGATTTCCCTGGCAACCCTTCTCATGTTTACAACTACACGGCGACTCCGCCGGCGGCAGCTTGGCAGACCACAAATGGCACCAAGGCTTACAGGCTGGCATTCAACTCCACAGTTCAGGTTGTTTTGCAGGATACTGGGGTCATTGCTCCTGAGAGCCACCCGGTTCATCTTCATGGGTTCAACTTCTTTGTTGTTGGCTCTGGTGTAGGAAATTATGATCCCAAAACGGATCAAAATAACTTTAATCTTGCGGATCCTGTTGAGAGGAACACAATTGGAGTGCCTACTGGAGGGTGGGTTGCTTTCAGATTCAGAGCAGATAACCCAGGTGCATACAACATGGGGGTTGAAGATGGCATTCTTGGTGGACAATGGTAA 1605 0.4542 MDSWVRMLFLIACIVPALVECKVRHYKFNVVLKNTTRLCSSKPIVTVNGKFPGPTLYAREDDTVLVKVNNLVNHNVTIHWHGVRQLRTGWADGPAYITQCPILSGQSYLYNFTLTGQRGTLLWHAHVNWLRSTLHGAIVILPKRGVPYPFPKPDKELVVILGEWWKSDTEDVINEALKSGLAPNVSDAHTINGLPGIVSVANCSTQVDVYKLPVESGKTYLLRIINAALNEELFFKIAGHPFTVVEVDASYVKPFKTDTLSIAPGQTTNALLTADQNSGKYTIVASTFMDSPVVAVDNLTATATLHYTGTLATTPTLLTTPPPRNATQVANNFTNSLKSLNSKKYPAKVPQKVDHSLLLTVGLGINPCPSCTAGNGSRVVAAVNNVTFVMPTTALLQAHYFNIKGVFTTDFPGNPSHVYNYTATPPAAAWQTTNGTKAYRLAFNSTVQVVLQDTGVIAPESHPVHLHGFNFFVVGSGVGNYDPKTDQNNFNLADPVERNTIGVPTGGWVAFRFRADNPGAYNMGVEDGILGGQW 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01812 534 SUPERFAMILY Cupredoxins 350 523 IPR008972 -
Gma18g01812 534 CDD CuRO_2_LCC_plant 158 307 IPR034285 -
Gma18g01812 534 Pfam Multicopper oxidase 33 143 IPR011707 GO:0005507
Gma18g01812 534 PANTHER LACCASE 4 523 - -
Gma18g01812 534 SUPERFAMILY Cupredoxins 150 323 IPR008972 -
Gma18g01812 534 Gene3D - 370 523 IPR008972 -
Gma18g01812 534 TIGRFAM laccase: laccase 21 523 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma18g01812 534 PANTHER MULTI-COPPER OXIDASE 4 523 IPR045087 -
Gma18g01812 534 SUPERFAMILY Cupredoxins 22 172 IPR008972 -
Gma18g01812 534 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Gma18g01812 534 Pfam Multicopper oxidase 156 309 IPR001117 -
Gma18g01812 534 Pfam Multicopper oxidase 431 523 IPR011706 GO:0005507|GO:0016491
Gma18g01812 534 Gene3D - 153 343 IPR008972 -
Gma18g01812 534 Gene3D - 16 142 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01812 Gma-Chr18 50357617 50361562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01812 K05909 - gmx:100806257 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01812 18 50357617 50361562 Gma14g00528 14 5073169 5080739 ECH
Gma18g01812 18 50357617 50361562 Gma18g01812 18 50357617 50361562 ECH