Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01802 ATGATGGAAGGAATCCTCATTTGTGTGGCTCCTCATTGTCTCAAGTCTTTCTTGAAGAAAGCTGATTTTGAATCTCATATCCAAGACAGCCACGGCAGCCTTCTTCGACCCAATGCAGATAAAGAAGATGGAAATGAGTCGGAGGCACAGAGTGTTAGGCAATCAACGGCTTCAGATTCCACTGCTCGCGACACACCTAGAGAGCAACCAAAGCCACCATATTATGGTCAACAACAACACCCTTCAGATACCATGTCTGCCTCTGTTGGTGGTGGACAACAGGGCTTTCATCTACAAAATTTTGACATGCAGCATCCCCCACAAGATCCTTCCCAGTTTGCTGACAGACAACAGGAAGTTGGTCCAGAGGCCCCATTTCTCGGGTATCCAGCAATGCACCCTGCAAAAACTTCCAATGTTCCCTTGCTGGTTACTTCAAACCCAATGCCGGACCCTCCCATGACATTTGGCTATCCCCCTTACCCAAACGAACGAGCTCAGCCATTTTACGGTGCTCCCTATGATATGCCTAGGCAGGACTCAGGTTCTGATGTAGGTGGGGACCAGAGTTCATTACTGGGTTTCCCACAAGGTGTCCCAAATGGCCCAAATTTTCCAGGAAATTATCCCCAGCCATGGAATTCAGGAATGGGTGGTGTGCCTTTTGAACAAGCACAGGGTGGTATGGTTGTGGATCCAAGGGAGGGCAAAGGTATATTGGCACCACAGCCCATGCCCCTCCCACCGCCACCTCCACCTCCATCCCACATGTCATATGGGAAACAGAACTACTATTCTGGGGAGCTTGGGCATGATGGTCAGAGTTATGGGGGGTGGCAGCATGATACCCGTGATAGCTTTGGTAGCCAAGGCTAG 876 0.5 MMEGILICVAPHCLKSFLKKADFESHIQDSHGSLLRPNADKEDGNESEAQSVRQSTASDSTARDTPREQPKPPYYGQQQHPSDTMSASVGGGQQGFHLQNFDMQHPPQDPSQFADRQQEVGPEAPFLGYPAMHPAKTSNVPLLVTSNPMPDPPMTFGYPPYPNERAQPFYGAPYDMPRQDSGSDVGGDQSSLLGFPQGVPNGPNFPGNYPQPWNSGMGGVPFEQAQGGMVVDPREGKGILAPQPMPLPPPPPPPSHMSYGKQNYYSGELGHDGQSYGGWQHDTRDSFGSQG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01802 291 MobiDBLite consensus disorder prediction 75 115 - -
Gma18g01802 291 ProSitePatterns Zinc finger C2H2 type domain signature. 8 31 IPR013087 -
Gma18g01802 291 MobiDBLite consensus disorder prediction 233 291 - -
Gma18g01802 291 MobiDBLite consensus disorder prediction 29 48 - -
Gma18g01802 291 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 1 264 - -
Gma18g01802 291 MobiDBLite consensus disorder prediction 49 63 - -
Gma18g01802 291 MobiDBLite consensus disorder prediction 29 118 - -
Gma18g01802 291 MobiDBLite consensus disorder prediction 242 257 - -
Gma18g01802 291 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 264 IPR040383 GO:0016567|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01802 Gma-Chr18 50038181 50039130 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01802 1 290 C2H2 Transcription Factor Family AT5G01160 37.667 5.14e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01802 K15685 - gmx:100803063 541.191