Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01775 ATGTCGGACGAAGAGCACCATTTCGAGTCCAAGGCCGACGCCAGTGACTCTAAAACCTACCCTCAACAAGCAAGTACCATTCACAAGAATGACTACATCGTCATCAAAGGCCGCCCCTACAAGCTCATTGATATTGCTGAGGATGGATTTTTGAGTCTGCTTACTAAAAATGGGAACACCAAGGATGACCTCAAGCTTCCCACTGATGAGAGTCTGCTCACTCAGATAAAGGATGGGTTTGTTGAGGGCAAGGATCTTGTTGTGTCTGTCATGTCTGCTATTGGTGAGGAACAAACTTGCGCTCTGAAGGATATTGGGCCTAAGAACTAG 330 0.4667 MSDEEHHFESKADASDSKTYPQQASTIHKNDYIVIKGRPYKLIDIAEDGFLSLLTKNGNTKDDLKLPTDESLLTQIKDGFVEGKDLVVSVMSAIGEEQTCALKDIGPKN 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01775 109 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 41 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Gma18g01775 109 Gene3D - 28 108 IPR012340 -
Gma18g01775 109 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5A 40 109 - -
Gma18g01775 109 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5A 1 41 - -
Gma18g01775 109 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 40 109 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Gma18g01775 109 PIRSF Transl_init_eIF5A 38 106 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Gma18g01775 109 PIRSF Transl_init_eIF5A 1 47 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Gma18g01775 109 SMART eIF_5a_2 34 103 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Gma18g01775 109 SUPERFAMILY Nucleic acid-binding proteins 36 105 IPR012340 -
Gma18g01775 109 MobiDBLite consensus disorder prediction 1 23 - -
Gma18g01775 109 CDD S1_eIF5A 35 105 - -
Gma18g01775 109 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 35 103 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01775 Gma-Chr18 49441906 49448000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01775 1 108 Eukaryotic Initiation Factors Gene Family AT1G69410 52.201 4.68e-48 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01775 K03263 K02180 pop:7465957 168.318