Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01772 ATGGTGATAAGTGGATGTTTGCTGGCCATGAGGAACCCCACAACAGGCTACTGGAGAGGATTATCCGTGGAACCTGCTGAGAGCAAGAGGCCATTCCGTGCTCTCCTTGACGTTGGTCTTATTAAGACTACAACCGGTAACCGCGTGTTTGGTGCCCTTAAGGGAGCTCTGGATGGGGGTTTGGATATTCCTCACAATGACAAGAGGTTTGCTGGGTTTGATAAGGAGAAGAAGGAGCTTGATGTAGAGGTTCATCGCAAATATGTTTTTGGTGGACATAATGGTATTGAGGCACTGTATAAGAAGGTTCATGCTGCCATCCGGGCTGATCCTACTCTCAAGAAATCTGATAAGCAGCCCCCAAAGGAGCACAAGAG 377 0.4828 MVISGCLLAMRNPTTGYWRGLSVEPAESKRPFRALLDVGLIKTTTGNRVFGALKGALDGGLDIPHNDKRFAGFDKEKKELDVEVHRKYVFGGHNGIEALYKKVHAAIRADPTLKKSDKQPPKEHK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01772 125 Gene3D - 14 95 - -
Gma18g01772 125 PRINTS Ribosomal protein L5 signature 35 54 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Gma18g01772 125 PRINTS Ribosomal protein L5 signature 55 74 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Gma18g01772 125 PANTHER RIBOSOMAL PROTEIN L5-RELATED 21 93 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Gma18g01772 125 PANTHER PROTEIN L5, PUTATIVE-RELATED 95 125 - -
Gma18g01772 125 Pfam Ribosomal L18 C-terminal region 96 125 IPR025607 -
Gma18g01772 125 PANTHER RIBOSOMAL PROTEIN L5-RELATED 95 125 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Gma18g01772 125 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 26 66 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Gma18g01772 125 SUPERFAMILY Translational machinery components 24 113 - -
Gma18g01772 125 PANTHER PROTEIN L5, PUTATIVE-RELATED 21 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01772 Gma-Chr18 49423709 49425447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01772 21 125 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 59.259 1.68e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01772 K02932 - gmx:100817746 184.111