Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma18g01744 | ATGGCTGAGGAGGGTTTTGAGCACTACCATGTCCCACAACAAAGTAGAAGGAACAAGCTGAGAGTTTTCCCTGAGCACCAACCTTATTGTTTCGTTGAATCTTCCTCCACTTGCCCTACTTTAGCCTCTCTCTACGATCCTTCGCTTATTATTCCTTCTGATTTGTTAGCTTGTGCCACCCAACAAGGTGGTGGTGGTGCTGCTGCTAAGGAACAAGAAGGTTCCAATTTGATGATGGGGTTTGTTAAAGGAGCGGTTGTGAATGGTGATGCAATTCAAGTCATCATCAACAACAACAACCCTTTATACCAGCTTCAGAACCTTAGGGAATATGGTGACACCTACAATGATGGGAGTGAAATGATGGTGTTCAAGCCTGAGCCTTTGTCTTTGTCCTTGTCTTCCCACAGTAACAGCACTCATCATTACCCTCTGGAACTGAATCTTCAGCGATATGGGGCTGTTAATCCGGGTTTGGTTGGAGGTAACAGTGAGGTTTCGAGGAATTCTGTTCCACTTGGACCCTTTACGGGGTATGCTTCGATATTGAAGGGATCGAGGTTCTTGAAACCCGCACAGCAATTATTGGAAGAGTTATGTGATGTTGGGGTTCGTGGAATTTACACCACCGAGAAGATTATTGCTCCTGATGCATCGTTGATGGAACCTCCTCGTGAGGGTTTTAGTGCTAGTGAAGTTGTTGGTGGGGATGATCCACTTGGGGAATATCAAAATTATGGTAGGATGAAGAAGTGTAGACTATTAACCATGCTTGACGAGGTTCACAGGAGGTACAGGCAGTATTATCAACAGATGCATGCAGTGATAACTTCATTTGAGTATGTTGCAGGCCTTGGTAATGTGGCCCCGTACGCAAGTTTGGCTATAAATGCCATGTCGAAACCATTTAGATGCTTGAAGAATGCTATTACTGACCAGCTTCAGTTCATCAACAAGGCTCCTTTTCAGATAAGCAACAGAAAGGATGAATCTCCAAGGTTCCACAGCAGTGATAGGGGCACTCACAGCCAAAGGCCAGGGTTTCTTGAGCACCAGCAACCAGTTTGGCGACCTCAAAGAGGACTCCCTGAGCGAGCTGTGAGTGTTCTCCGAGCCTGGTTGTTTGAACACTTTCTGCACCCTTATCCTACTGATACTGACAAGTTAATGTTGGCTAAACAAACCGGTCTATCTCGCAACCAGGTGTCTAATTGGTTTATTAATGCAAGAGTAAGGCTTTGGAAACCAATGGTGGAGGAAATACATATGCTAGAATCACAACAAGGTCAAAAGAGGTCACATTGGGAAGAAAGAAGTAAGAAAAACCTAAGTGATCATTTACCTTCAGATCACAACTCTGTTGTTACTGAGAATCCATCCACCTCCATGGAGAAGTTTCATGATGCCCCTTATAAACACCCTAGAAATGAACTTGCTAACAAGCAAGTGAGGAGTCAGGAGCAGCTGAATCAGACCAACACAGGCAATCAGCAAGTCATGGGTGTTGGAGTGAGCAATAATGGGGTGTCTCTCACACTTGGTCTTCACCAAAATCATCACGGTATTGGGTTGTTTGAGCCCTTTGGAATGAGTGCAGCTCAACGTTTTGGCGTTGCCCTTCAGCCTGAGGGCTATGTTCTTAGTAGTTTTGAATCACAAAATCGACATTTTGGAAGAGATGTTATTGGAGGAGGGCAATTGTTGCATGATTTTGCATGCTGA | 1722 | 0.4472 | MAEEGFEHYHVPQQSRRNKLRVFPEHQPYCFVESSSTCPTLASLYDPSLIIPSDLLACATQQGGGGAAAKEQEGSNLMMGFVKGAVVNGDAIQVIINNNNPLYQLQNLREYGDTYNDGSEMMVFKPEPLSLSLSSHSNSTHHYPLELNLQRYGAVNPGLVGGNSEVSRNSVPLGPFTGYASILKGSRFLKPAQQLLEELCDVGVRGIYTTEKIIAPDASLMEPPREGFSASEVVGGDDPLGEYQNYGRMKKCRLLTMLDEVHRRYRQYYQQMHAVITSFEYVAGLGNVAPYASLAINAMSKPFRCLKNAITDQLQFINKAPFQISNRKDESPRFHSSDRGTHSQRPGFLEHQQPVWRPQRGLPERAVSVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQGQKRSHWEERSKKNLSDHLPSDHNSVVTENPSTSMEKFHDAPYKHPRNELANKQVRSQEQLNQTNTGNQQVMGVGVSNNGVSLTLGLHQNHHGIGLFEPFGMSAAQRFGVALQPEGYVLSSFESQNRHFGRDVIGGGQLLHDFAC | 573 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma18g01744 | 573 | SMART | prehox3 | 177 | 312 | IPR006563 | - | |
Gma18g01744 | 573 | MobiDBLite | consensus disorder prediction | 448 | 463 | - | - | |
Gma18g01744 | 573 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 35 | 84 | - | - | |
Gma18g01744 | 573 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 87 | 549 | - | - | |
Gma18g01744 | 573 | ProSiteProfiles | 'Homeobox' domain profile. | 353 | 416 | IPR001356 | GO:0003677 | |
Gma18g01744 | 573 | Pfam | Homeobox KN domain | 373 | 412 | IPR008422 | GO:0003677|GO:0006355 | |
Gma18g01744 | 573 | MobiDBLite | consensus disorder prediction | 327 | 355 | - | - | |
Gma18g01744 | 573 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN | 35 | 84 | - | - | |
Gma18g01744 | 573 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN | 87 | 549 | - | - | |
Gma18g01744 | 573 | SUPERFAMILY | Homeodomain-like | 358 | 423 | IPR009057 | - | |
Gma18g01744 | 573 | Pfam | Associated with HOX | 182 | 311 | IPR006563 | - | |
Gma18g01744 | 573 | MobiDBLite | consensus disorder prediction | 425 | 467 | - | - | |
Gma18g01744 | 573 | SMART | HOX_1 | 356 | 420 | IPR001356 | GO:0003677 | |
Gma18g01744 | 573 | CDD | homeodomain | 356 | 417 | IPR001356 | GO:0003677 | |
Gma18g01744 | 573 | MobiDBLite | consensus disorder prediction | 425 | 447 | - | - | |
Gma18g01744 | 573 | Gene3D | - | 359 | 421 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma18g01744 | Gma-Chr18 | 48767931 | 48773699 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma18g01744 | 4 | 572 | Homeobox Transcription Factor Family | AT5G02030 | 44.646 | 1.78e-126 | 381 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-BELL | Gma18g01744 | POX | 1.4e-36 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma18g01744 | - | - | gmx:100790713 | 1137.87 |