Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01722 ATGCCGCAACACCATCATGGGCATGGACTATGTCGTGGAGGATCTCATGCTGGACAACTTCGAAGGCATCAACATCGTGATCTTCAGCGCCTGTGGTCCATAATAGTAAAGCATAACAATGTTGTAGTGGTTTCCTCAAGCCATCACAAGAGCAGCAAGGCTCACTTCACTGCTCCATCGAGTATGCGTCACGTCCTAATGAGTGCGCCTCTCTCCACCGATCTCCGATCAAAGTACAACGCGTGGTCCATTCCGCTTCGCAAGGACGACGACGTTCAGGTTGTGAAAGGAACCTACAAGGGCCACGAGGGCAAAGTAGTCCAGCTTTATTTTTGTTTGTGGGTCATCCACATTGAGCACATCATCCGTGAGAAGGTTAACGGGTCCACCGTTAACGTTGGCATTCACCCTTCCAAGGTTGTCGTCACCAAGCTCCGAATTTACAAGGACCGCAAATTCTTGCTTGATTGGAAGGCCAAGGGTTGCGCCACTACTGACAAGGAAAAGGGTACCAAGTTTGCTCATGAGGATATCGTTTAG 540 0.4963 MPQHHHGHGLCRGGSHAGQLRRHQHRDLQRLWSIIVKHNNVVVVSSSHHKSSKAHFTAPSSMRHVLMSAPLSTDLRSKYNAWSIPLRKDDDVQVVKGTYKGHEGKVVQLYFCLWVIHIEHIIREKVNGSTVNVGIHPSKVVVTKLRIYKDRKFLLDWKAKGCATTDKEKGTKFAHEDIV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01722 179 CDD KOW_RPL26 89 142 IPR041988 GO:0003723
Gma18g01722 179 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 43 179 IPR005756 GO:0003735|GO:0006412|GO:0015934
Gma18g01722 179 SUPERFAMILY Translation proteins SH3-like domain 45 160 IPR008991 -
Gma18g01722 179 ProSitePatterns Ribosomal protein L24 signature. 89 106 IPR005825 GO:0003735|GO:0005840|GO:0006412
Gma18g01722 179 TIGRFAM rplX_A_E: ribosomal protein uL24 45 158 IPR005756 GO:0003735|GO:0006412|GO:0015934
Gma18g01722 179 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 45 156 IPR005756 GO:0003735|GO:0006412|GO:0015934
Gma18g01722 179 Gene3D - 37 178 IPR014722 -
Gma18g01722 179 PANTHER 60S RIBOSOMAL PROTEIN L26-1 43 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01722 Gma-Chr18 48113693 48115931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01722 44 179 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 70.588 1.94e-68 203