Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01721 ATGCAAAACGAGGTCCAAATTCTCTGCCAAGTAAACCACAGAAGCCTAGTGAGACTCCTTGGCTGTTGCTTGGAACTTGAACACCCTTTGCTAATATACGAGTATATTTCAAATGGGACCCTTTTCAATTACCTTCATCGCCACTCTTCTGGCTCGAGGGAACCCCTCAAATGGCACCAAAGACTCAAAATTGCACACCAGACAGCTGAAGGGCTTTGTTATCTGCATTCTGCAGCCGAGCCTCCAATTTACCATCGCGACGTGAAATCGAGCAATATACTTCTTGATGACAAGCTTGATGCAAAGGTTTCTGATTTTGGGCTATCTAGGCTTGTTGAATTGGCTGAAGAGAACAATAGCCATATTTTCGCTAGTGCTCAAGGGACACGGGGGTATCTTGATCTGGAGTATTACCGTAACTTTCAGTTGACGGATAAGAGCGATGTTTATGGCTTTGGAGTGGTGTTGATGGAGTTGCTCACTGCTCAGAAGGCAATTGATTTCAATAGGGAGGAAGAGAGTGTGAACTTGGCCATGTATGGGAAGAGGAAAATGGTTGAGGACAAGTTGATGGATGTGGTTGATCCTTTGCTTAAAGAAGGAGCAAATGAGTTGGAATTGGAAACTATGAAGTCATTGGGGTATCTTGCAACTGCCTGCTTGGATGAGCAGAGGCAAAAAGGGCCTTCGATGAAAGAAGTTGCTGATATTAACGCCAACGCAAGAGTCCAAGGAGCTAGTGGGAGTGCATTCAATGAAATGAGCAACGAAATCCGGTTCTTCGAGCTAAACACTGGAGCTAATATCCCTTCACTAGGGCTGGGAACTTGGCTGGCTGATCCTGGTGTTGTTGGTGATGTTATAGCTCATGCCGTCGAGGTTGGTTATCGCCATATTGATTGTGCTCAAATTTACGGCAATCAGGAGGAGATTGGTTTAGCATTAAAGAAGTTATTTGAAGAGGGTGTAGTCAAGCGAGAAGATTTATGGATCACCTCTAAACTCTGGTGTACAGATCATGCTCCAGAAGATGTACCAGAAGCTCTGGACAGAACATTGAGAGACTTGCAACTTGATTATATAGATTTATACCTTATTCACTGGCCAATTCGAATGAAGAAGGGTTCAGTGGGCTTTAAGGCTGAAAACATTGTGCCATCAGACATACCTAACACTTGGAAGGCAATGGAAGCTTTGAATAAAAGTGGCAAGGCTAGAGCTATAGGTGTAAGCAATTTCTCAACTAAGAAGTTGGGAGAATTGCTTGAGTATGCTCGTGTTACTCCTGCGGTTAACCAGTCAGAGTGTCATCCTGCATGGAGGCAGGACAAGTTGAAGGCCTTTTGCAAATCTAAGGGTGTCCACTTCTCTGGATATTCACCTTTGGGTTCCCCTGCCTGGCTTGAAGGTGATTTCCTTAACCATCCAGTTATAAATATGATCGCAAAGAAATTAGGAAAGACTCCAGCACAGGTAGCTCTTCGATGGGGACTGCAAATGGGCCATAGTGTGCTTCCCAAGAGTTCTAATCCAGCAAGGATAAAGGAAAACTTTGATATTTTTGACTGGTCCATTCCTGAGGACATGCTTGATAAATTTTTTGAGATTCAACAGatgtcgtctcgggtttcgaagtgtattacagagcaagagtctggtcaggacctgctcgaatcgaaaagagaggagagtctttaa 1698 0.4176 MQNEVQILCQVNHRSLVRLLGCCLELEHPLLIYEYISNGTLFNYLHRHSSGSREPLKWHQRLKIAHQTAEGLCYLHSAAEPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENNSHIFASAQGTRGYLDLEYYRNFQLTDKSDVYGFGVVLMELLTAQKAIDFNREEESVNLAMYGKRKMVEDKLMDVVDPLLKEGANELELETMKSLGYLATACLDEQRQKGPSMKEVADINANARVQGASGSAFNEMSNEIRFFELNTGANIPSLGLGTWLADPGVVGDVIAHAVEVGYRHIDCAQIYGNQEEIGLALKKLFEEGVVKREDLWITSKLWCTDHAPEDVPEALDRTLRDLQLDYIDLYLIHWPIRMKKGSVGFKAENIVPSDIPNTWKAMEALNKSGKARAIGVSNFSTKKLGELLEYARVTPAVNQSECHPAWRQDKLKAFCKSKGVHFSGYSPLGSPAWLEGDFLNHPVINMIAKKLGKTPAQVALRWGLQMGHSVLPKSSNPARIKENFDIFDWSIPEDMLDKFFEIQQMSSRVSKCITEQESGQDLLESKREESL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01721 565 PANTHER ALDO/KETO REDUCTASE 257 547 - -
Gma18g01721 565 ProSitePatterns Aldo/keto reductase family putative active site signature. 505 520 IPR018170 GO:0016491
Gma18g01721 565 Gene3D - 257 560 IPR036812 -
Gma18g01721 565 ProSitePatterns Aldo/keto reductase family signature 1. 295 312 IPR018170 GO:0016491
Gma18g01721 565 Gene3D Transferase(Phosphotransferase) domain 1 37 255 - -
Gma18g01721 565 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01721 565 Pfam Aldo/keto reductase family 285 533 IPR023210 -
Gma18g01721 565 SMART serkin_6 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01721 565 SUPERFAMILY Protein kinase-like (PK-like) 2 235 IPR011009 -
Gma18g01721 565 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
Gma18g01721 565 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 257 547 - -
Gma18g01721 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
Gma18g01721 565 PRINTS Aldo-keto reductase signature 351 369 IPR020471 GO:0016491
Gma18g01721 565 PRINTS Aldo-keto reductase signature 291 315 IPR020471 GO:0016491
Gma18g01721 565 PRINTS Aldo-keto reductase signature 396 413 IPR020471 GO:0016491
Gma18g01721 565 PRINTS Aldo-keto reductase signature 430 459 IPR020471 GO:0016491
Gma18g01721 565 PRINTS Aldo-keto reductase signature 472 496 IPR020471 GO:0016491
Gma18g01721 565 ProSitePatterns Aldo/keto reductase family signature 2. 396 413 IPR018170 GO:0016491
Gma18g01721 565 Pfam Protein tyrosine and serine/threonine kinase 1 199 IPR001245 GO:0004672|GO:0006468
Gma18g01721 565 CDD AKR_AKR4C1-15 259 539 IPR044498 GO:0016491
Gma18g01721 565 SUPERFAMILY NAD(P)-linked oxidoreductase 259 536 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01721 Gma-Chr18 48066488 48075486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01721 3 236 Receptor kinase-like Gene Family AT5G02070 69.915 4.28e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma18g01721 Aldo_ket_red 2.8e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01721 K00002 - gmx:100788951 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01721 18 48066488 48075486 Gma18g01721 18 48066488 48075486 ECH
Gma18g01721 18 48066488 48075486 Gma07g01272 07 16568026 16573715 GST