Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01717 ATGGATGCCACTTCTATAATGCATTTGTTGAAGGGCTTTTGTGATCACACACAATGGAAATATGCTGGTTTTTGGAAGCTTGACCAACATTTTCCTATGACGTTGACCTGGGAAAATGGTTACCAGAAAAGAGATGAGGTTAAGGAAAGTATGTGGGGTGACCTCAGTTTCAAATCCCCAGATGAGTTATATTCTTCAAGCGGTGAAAATTCTGATTATTCGGCTCGATTACTCTTGATTGAAATGTCTCATCGCAAATACAGTTTGGGAGAAGGGGTTGTTGGCAAAATAGCTCTCGCCAGGGATCATTGTTGGGTTTCATATGAGGATATTCTCACCAGTAAATTTGACACAGATTTAATCACTGAGTGTCCTGATGAGTGGCTGCTTCAATTTGCATGTGGCATCAAGACTATTGTGCTTGTACCAGTGCTTCCACAAGGGGTTTTGCAATTCGGTTCATTTGAAGCGGTTGCTGAAGACAAGGAATTTGTTACCAATATCAAGGAGAAATTCTATTCCACTCATTATCTGGAAGCAGATATTACCCCTTTAAATTTGGGAACTGATTGTCAAGATGTGTCATTCTCAGACCTAATGCATAATTTGATGGGCAGTTTGGATGAATCATCATCTTCTGTTACAAAAAGTATATTGAAAAGTGAAGTTTCAACTAGTCCTGCTGCCCTCAATTCAAATGGTTCAAGGTTGAACCCGACTATGCTATCATTTATTCAGGATGACTGTTTCTTTTCTAGAGAAAATTTACTAGAATCTCTGAAAAGAGAAAATGAAAATGAGATAGGTTCCTCATCAACTGAGATGCCAAGACATATCGGTAAGGTGGAGACAAAACCTAATCATATGGAAGAGATATGGTCCTGGTCTCACTTGCTCAACAATGTTGGAGTATTTAGAGAGATGTCAAATGGATTAGACTCTTCCTCGGTTATAAATACGACACAGAAACAACTTGGAGGCATTGAAACTGGCCATGATGCTAAGAATGTGAATGACTTCGCTTTTCCCTCAGAGTCTGAATTCTGCAAAGCACTTGGATCAGTTTCATATGGAGAGACAGGCAAATTTATGTCAAAATGTATCTCTGTTGAGGAAACATACAGTAACTCAACTCTTGTAATCAACAAAAAAGAGCATGATCATATTAAAGGTTTGGAGTTTCCCAAAGATGTTGATCTGGAATATCTTTTAGATGCTGTTGTTGGCAATTTTTGTGGTGCTGCTGCTGATACTTCAAGTATATCCAACAGTGTTAGGTCTCTTACAACCATGCCAACAGAGTTTACCAGTTCCATTCAGCCAGAAAATTATTCAGAAGAAAGCACTTTGATTGTGGATAGTTCAGATGTGAAAAATGATCTTATGCCTGCAATCATGGTCAAGGGAAAAGATGAATTTTCTAACCATTTTACATCATCTTTTGATGGAAATGCAAGCTTATTGATTGACAAGGCACAACAGGAAAAGGCTAATAGTCATATGCAGCCTATTGGTGGACCAAAGCTCTCTAGCTCAAGCAAGAAAAGAACAAGAGTTGGTAACAACCAAAAGTCAAGGCCAAGAGATAGACAGCTGATCATGGACAGGATGAAGGAGTTGAGAGAACTTGTCCCAGAAGGTGGTAGGTGTAGTATTGACAACCTCTTGGAACGTACCATAAAGCACATGCTGTACTTGAGAAAGATAACAAGCCAGGCTGAGAAACTGAAACGAATTGCTAATCGGGCGGTTCCCGAGTGCAAAAGACAGAAAGTCAATGCTAGCCACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAAGTATCCTGGCCTATAGTCATAGAAGATCTGGAATGCTCAGGGCACATGCTCATAGAGATGATATGCAACGAGCATGGACTCTTCTTGGAGATTGCTCAGGTGATCCGGAAGCTGGATGTCATCATCTTGAAAGGGATCTTGGAAAACTGTTCCAGCAACAGTTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATGTTCTATGTCCTTTACTGCATCTTCTGCAGCTTAGGAGAAACCCTGTCTCTTGTAAAAGCTGA 2097 0.4025 MDATSIMHLLKGFCDHTQWKYAGFWKLDQHFPMTLTWENGYQKRDEVKESMWGDLSFKSPDELYSSSGENSDYSARLLLIEMSHRKYSLGEGVVGKIALARDHCWVSYEDILTSKFDTDLITECPDEWLLQFACGIKTIVLVPVLPQGVLQFGSFEAVAEDKEFVTNIKEKFYSTHYLEADITPLNLGTDCQDVSFSDLMHNLMGSLDESSSSVTKSILKSEVSTSPAALNSNGSRLNPTMLSFIQDDCFFSRENLLESLKRENENEIGSSSTEMPRHIGKVETKPNHMEEIWSWSHLLNNVGVFREMSNGLDSSSVINTTQKQLGGIETGHDAKNVNDFAFPSESEFCKALGSVSYGETGKFMSKCISVEETYSNSTLVINKKEHDHIKGLEFPKDVDLEYLLDAVVGNFCGAAADTSSISNSVRSLTTMPTEFTSSIQPENYSEESTLIVDSSDVKNDLMPAIMVKGKDEFSNHFTSSFDGNASLLIDKAQQEKANSHMQPIGGPKLSSSSKKRTRVGNNQKSRPRDRQLIMDRMKELRELVPEGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRIANRAVPECKRQKVNASHPGRSCAFDFESEVSWPIVIEDLECSGHMLIEMICNEHGLFLEIAQVIRKLDVIILKGILENCSSNSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPVSCKS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01717 698 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 517 566 IPR011598 GO:0046983
Gma18g01717 698 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 697 - -
Gma18g01717 698 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 697 IPR043561 GO:0003700|GO:0006355
Gma18g01717 698 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 172 IPR025610 -
Gma18g01717 698 MobiDBLite consensus disorder prediction 494 518 - -
Gma18g01717 698 MobiDBLite consensus disorder prediction 494 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01717 Gma-Chr18 47966085 47971108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01717 346 692 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 35.215 6.22e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01717 - - gmx:100776855 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01717 18 47966085 47971108 Gma18g01717 18 47966085 47971108 ECH
Gma18g01717 18 47966085 47971108 Gma07g01271 07 16511421 16517845 GST