Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01703 ATGGAGTTCAATTCCCAAAACCCTAAAAAATCTGAGATAAGATGGAGCCCAGATAATCAAGGTGGTCCTGGACAAGGGAAGTCTTATTCTTGTTACTTTTGCAAGAGAGGGTTCTCAAATGCACAGGCCCTGGGAGGCCACATGAATATCCATAGAAAAGATAGGGCGGCAAAGCTCAAGCAATCTTCTGAGGAAAACTTGCTTTCATTGGATATCTCAATCAAGGCCACAAGTGATCATCCTAATGACCCTTCTGATTTCGAAGAGAAAATTTTGTTTCGGTTGGGTGCTGGTGAAGAGAAGCATCCTAGAAACCATAAATATCCATTCAATTTTTTTCCTCGCAAAGATGATCATCATGATCATGCACCACAAATTCCCCATCTTCCTTCTTTTGTTTTGGGGCAGATGGTTGAGGAGAAGAAAGCTGAATTAGACCTTGAGCTTAGGTTAGGGCTTCATCCTCGGGAGTCAGCAACATTGAACACTAGATCGTTCTTTTGA 504 0.4206 MEFNSQNPKKSEIRWSPDNQGGPGQGKSYSCYFCKRGFSNAQALGGHMNIHRKDRAAKLKQSSEENLLSLDISIKATSDHPNDPSDFEEKILFRLGAGEEKHPRNHKYPFNFFPRKDDHHDHAPQIPHLPSFVLGQMVEEKKAELDLELRLGLHPRESATLNTRSFF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01703 167 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Gma18g01703 167 MobiDBLite consensus disorder prediction 1 26 - -
Gma18g01703 167 SUPERFAMILY beta-beta-alpha zinc fingers 26 56 IPR036236 -
Gma18g01703 167 Gene3D Classic Zinc Finger 6 83 - -
Gma18g01703 167 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 64 - -
Gma18g01703 167 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 68 157 - -
Gma18g01703 167 PANTHER OS07G0101800 PROTEIN 68 157 - -
Gma18g01703 167 PANTHER OS07G0101800 PROTEIN 1 64 - -
Gma18g01703 167 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01703 Gma-Chr18 47637898 47638401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01703 25 160 C2H2 Transcription Factor Family AT3G53820 36.364 8.45e-15 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma18g01703 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01703 - - gmx:100527901 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01703 18 47637898 47638401 Gma07g01265 07 16409246 16409719 GST