Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01671 ATGGATCCTCGTCTTCTTGGGTTTAGTGGTTCCCCTAATGAAATCCAGTTGGGAAATCAGAGATTTGAAAATGGTTTCTTTGATCAAAGTAGGGAATTTGGTTACCTTCAGTCCAATCTACTACCAATTGACACACCTTCTTCATCCTCGGTTTGGACTCATGAGGAACCTTCTCCGGAGGATTGTGAATTTTCTGATGGAATTTTGAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGATAAGACATGCATGTTACAAGATTCATTGGATCTTCAAATTGCTGAGAGATCATTCTATGAGGTAATTGGTGAAAAGTACCCTTCTTCGCCTTTAGGGCATCCAAGTTCTGTTGATCCAGATGATGGGGGTGGGGTGGATAATTTCTCTGAAAATTATGGTACTTGTTCTTACAATGATGGTGACCTCAGTAGCATTTTTACTAACAATTCTTTGCGCCGAAATTTGGGGGAACTTCCTAACCAGAATTTTCGAGGCAATAGCATTTCCCGGTCATCTTATAGCTCTCCAAATAGTGTCATAAGTAGTGTGGAAGGGCCTGTAGACTCTCCAAGCAGTATTCTCCAGGTTCCTGATCTGAACAGTGAGACTCAATCCATTTTGCAATTTCAGAAGGGTGTTGAGGAGGCTAGCAAGTTTCTTCCAAGTGGAAATGGACTCTTTGCTAATTTGGGTGTGGCTAATTTTTCAAAACTAGAGCCTAGAGTGGGGAGTGATGAATTGCCTGTTAAGGTGGAGAAGGACGAGGGTGAGTCTTTTCCTGCTGGATCCAAAATAAGGAAGCATCATCACAGGGAAGAGGGGGGTGTTGAAGAAAATAGAAGCAGCAAGCAAGCCGCAATTTTCTCTGAACCTACATTGCGATCATCCATGATTGATATAATCCTGCTTCATAGTTTAGGGGATGGCAAGAAGCATTTTATGGCCCGCCGTGAGGCCTTGCAAACCAAGAATGAGAAGATAGTGGTGTCAAATGGTAAATCAAAGGCTTCCAATGGTGGCAAGGGGCGTAGTAAGAAACAAAATGGGAAAAAGGAGGTGGTAGATTTGAGAACACTTTTGGTTCTTTGTGCTCAGGCTGTTGCTGCAGATGACTATAAAGGTGCAAACGAGTTGCTAAAGCAGATCAGGCAGCACTCAAACCCTTTTGGGGATGGGAATCAGAGGTTGGCTCATATCTTTGCTGATGGCCTTGAAGCGCGCTTGTCTGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCGGCTGCTGATTTTCTGAAGGCCTATCATCTATATCTTGCTGCTTGCCCTTTTAGGAAGATGACTGCTTTTATCTCTAATGTTACAATAAGGAAATCTTCAGCAAATTCACCAAGACTCCATATTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTAATTCAGAGACTTTCATTAGCAGGAGGAGCACCTAAACTCCGGATTACTGGAATAGACTCCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTGTAGAAACTGGACGCCGCTTGGCGGCATATGCTGAATCATTTAAGGTGGAATTTGAGTACAATGCTATAGCTAAAAAATGGGAAACAATTCAACTTGAGGAACTCAAGATTGATAGGGACGAGTACCTCGTTGTTACCTGTTTTTATCGTGGTAAAAATGTGCTGGATGAATCTGTGGTTGTGGACAGTCCAAGGAATAAATTCCTCAGTTTGATAAGGAAGATCAACCCGAATATATTCATTCATGGCATTACTAACGGGGCCTTCAATGCGCCTTTTTTTGTTACTCGATTCAGGGAGGCACTGTTTCACTACTCTTCACTCTTTGACATGCTTGAAGCCATTGTTTCTCGCGAGGAATGGGAGAGGATGCTCATTGAGAAAGAAATATTTGGTAGGGAAGCATTGAATGTCATAGCATGTGAAGGCTGTGAGAGAGTAGAGAGGCCAGAGACATATAGGCAGTGGCAAGCCCGAATTCTAAGGGCTGGATTTTTGCAACAACCTTTTGAGCGTGAGATAGTAAAGAGGGCAATAGAGAAAGTAACAACTAGCTACCACAAGGATTTTGTAATTGATGAAGATAGCCAATGTTTGACTTCTGAGGAGCTCAGGGTTCGAGATCAAAAATAA 2175 0.4239 MDPRLLGFSGSPNEIQLGNQRFENGFFDQSREFGYLQSNLLPIDTPSSSSVWTHEEPSPEDCEFSDGILSYISQILMEEDMEDKTCMLQDSLDLQIAERSFYEVIGEKYPSSPLGHPSSVDPDDGGGVDNFSENYGTCSYNDGDLSSIFTNNSLRRNLGELPNQNFRGNSISRSSYSSPNSVISSVEGPVDSPSSILQVPDLNSETQSILQFQKGVEEASKFLPSGNGLFANLGVANFSKLEPRVGSDELPVKVEKDEGESFPAGSKIRKHHHREEGGVEENRSSKQAAIFSEPTLRSSMIDIILLHSLGDGKKHFMARREALQTKNEKIVVSNGKSKASNGGKGRSKKQNGKKEVVDLRTLLVLCAQAVAADDYKGANELLKQIRQHSNPFGDGNQRLAHIFADGLEARLSGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRKMTAFISNVTIRKSSANSPRLHIIDFGILYGFQWPTLIQRLSLAGGAPKLRITGIDSPQPGFRPAERIVETGRRLAAYAESFKVEFEYNAIAKKWETIQLEELKIDRDEYLVVTCFYRGKNVLDESVVVDSPRNKFLSLIRKINPNIFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLEAIVSREEWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFLQQPFEREIVKRAIEKVTTSYHKDFVIDEDSQCLTSEELRVRDQK 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01671 724 MobiDBLite consensus disorder prediction 332 352 - -
Gma18g01671 724 MobiDBLite consensus disorder prediction 256 285 - -
Gma18g01671 724 MobiDBLite consensus disorder prediction 332 346 - -
Gma18g01671 724 Pfam GRAS domain family 359 714 IPR005202 -
Gma18g01671 724 MobiDBLite consensus disorder prediction 256 282 - -
Gma18g01671 724 ProSiteProfiles GRAS family profile. 350 724 IPR005202 -
Gma18g01671 724 PANTHER SCARECROW-LIKE PROTEIN 9 32 713 - -
Gma18g01671 724 MobiDBLite consensus disorder prediction 160 189 - -
Gma18g01671 724 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 713 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01671 Gma-Chr18 46942475 46944877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01671 60 713 GRAS Transcription Factor Family AT2G37650 52.174 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma18g01671 GRAS 3e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01671 - - gmx:100801824 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01671 18 46942475 46944877 Gma18g01671 18 46942475 46944877 ECH
Gma18g01671 18 46942475 46944877 Gma11g01254 11 10681268 10684474 ECH
Gma18g01671 18 46942475 46944877 Gma12g00552 12 4619557 4625233 ECH