Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01655 ATGGGTGTTTGGTTTGGTTGCTTCAGCGTAGACAAACACATGTGCAAGGAAGAAGAGAGATTGACCTCTGAAGAAGCACATGCCAAAGCTGCCGAAGCTGCACAGAAAAGCACCTTGCTTCGCCACACAACAGCAACTGCAGCAATGGCTCCCAAACGAGGTGGAAAGGCTCCGGCTATTGCCGCTAAGACCAAGCCTGTTTCAAATCTGCTGTTTGAGAAGCGTCCAAAGAAGTTCAGAATCGGAGGGGCGTTGCCTCCGAAGAGAGACTTGACTCGGTTCATGAAGTGGCCAAAGAATGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAAAGGTTGAAGGTTTCTCCAGCTTTGGACCAGTTCACCAAGACTCTTGACAAAAACCTAGGCACATCCGAATATGATTATTTATCTACTATAGGATATTATTTTGGTGATGTGTATGTTGTTACTCTGAGACATGCTCCTGTTTCTCATTACTATGGCGGGTTGAGAAGAGAGGTTAATGGCTTCAAAGATGCTAAGAAGGGAGCATGGTTTCAAGATGGTGGGTTCGAGACTGCTAGAGAAGGAGTTGTTATAGGGTTCGTTGAGAATTTTTGCGTTGTTAGACATGACTTTTCGATGAGGAAAAAGGAATGGGAGAGCAACACGGACAATCACAGTGAAGAAGACGCATATGCAATGCTCAAGGAATGTTCCATGGATCCCAACAAGACTACTCAGAAGCTTCTCCTTCAGGGAGGAAAGCTTAGTGCAGGTGTAAACCATGAAGGAGTGAACTACTACAACAACCTCATCAATGAGCTCATGGCTAATGCACATCGGCCTATTAAAGAGATATTAGAAAAGGGAAAAAAAGAACATGTTGCTGCTCTAGTAGAAGGGAAATTGGGTGAGGTGAACGTTCTTCGGTTTGCTATGAGAAGTCAAGGACCTGCTAGGATCTTCACCATCGTCCACTTGTGGAGGTGGAACCGTGACTTATGTCAAAGCCTTCAATGA 1011 0.4491 MGVWFGCFSVDKHMCKEEERLTSEEAHAKAAEAAQKSTLLRHTTATAAMAPKRGGKAPAIAAKTKPVSNLLFEKRPKKFRIGGALPPKRDLTRFMKWPKNVQIQRKKRILKQRLKVSPALDQFTKTLDKNLGTSEYDYLSTIGYYFGDVYVVTLRHAPVSHYYGGLRREVNGFKDAKKGAWFQDGGFETAREGVVIGFVENFCVVRHDFSMRKKEWESNTDNHSEEDAYAMLKECSMDPNKTTQKLLLQGGKLSAGVNHEGVNYYNNLINELMANAHRPIKEILEKGKKEHVAALVEGKLGEVNVLRFAMRSQGPARIFTIVHLWRWNRDLCQSLQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01655 336 Pfam GBF-interacting protein 1 N-terminal 220 249 IPR009719 -
Gma18g01655 336 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 33 139 - -
Gma18g01655 336 PANTHER - 33 139 - -
Gma18g01655 336 SUPERFAMILY UBA-like 222 250 IPR009060 GO:0005515
Gma18g01655 336 Gene3D - 97 143 IPR029064 -
Gma18g01655 336 PRINTS Ribosomal protein L7A family signature 113 132 IPR001921 -
Gma18g01655 336 PRINTS Ribosomal protein L7A family signature 93 110 IPR001921 -
Gma18g01655 336 PRINTS Ribosomal protein L7A family signature 76 93 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01655 Gma-Chr18 46460439 46468066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01655 49 139 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 66.667 5.78e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01655 K02936 - gmx:102665871 273.478