Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01646 ATGCCTTCATGGTCGTCTTCTTCTTCCGCTCTAACCGCTCCCAATTTGCGTCTTCGCACTCTCAGAATTTGGTCCTCCAAGGACTATGCAATCGCCGCATTCATTTTCCTCATTCTCTTCTCTCTCCTTCTCTTCTCCCACTTGGATTCCCGTTCCCATTCCCGTTACGATTCCCAGCCCCATCACTCCAAGCTCGTTCCGTTAACCCTCCTCCGCAACGCCAACCAAACGCGCGCGCTTTGCTTGGACGGGAGCGCTCCCGGTTACCATTTCCAAAGCGGGTTCGGATCCGGATCCCGCAATTGGCTGATCCACATTGAGGGAGGAGGGTGGTGCAATTCGATACCTTCTTGCTACCAGCGAAAATTCACTCATTTGGGGTCTTCCGATCATATGGAGAAGCTTATTCCTTTTTCAGGAATTTTGAGCTCTGACCCTGCTCAGAACCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGTTATTGTGACGGTGCATCTTTTGCGGGTCATCCAGAGAGTGAGAGAGGAAGTGGGTTGTTCTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTATCAACTGGCCTGTCTAATGCAAAGCAGGCTTTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTTATACACTGTGATAGTTTCCGACAAGTACTTCCAAAGGAAGCAACTGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCTTTCTATCATGATGTTGCCCAGCTTCAGGGTCTTGCAAAAAGTTTGCACAAAGATTGCATTGCTAAAATGGAACCATCTAAGTGTCTCTTTCCATCAGAAATTGCTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATTTTGGTGCCTCAAGGATCAGATCCTGATGGTCACTGGCAAAGGTGCAGACTGGACATTCGCAGTTGTAATGCTAATATGATTGATAAACTTGACAGTTACCGTGGCTCTTTGCTGAAGGCTGTGAATGAATTCCAACAACGAAAGGAGATTGGAATGTTTATAGATTCATGCTTCGTCCATTGCCAGACTGAGATGGAAGTGACGTGGCATTCACCCAACTCTCCTAAAATAAATGATAAGACAATTGCGGAATCTGTTGGTGATTGGTACTTTGACCGAGAAGCGGTAAAGCGCATTGACTGCTCTTCTTTTTCGTGCAACCCCACTTGCCACAACATGGATTTCACCTGA 1296 0.4614 MPSWSSSSSALTAPNLRLRTLRIWSSKDYAIAAFIFLILFSLLLFSHLDSRSHSRYDSQPHHSKLVPLTLLRNANQTRALCLDGSAPGYHFQSGFGSGSRNWLIHIEGGGWCNSIPSCYQRKFTHLGSSDHMEKLIPFSGILSSDPAQNPDFFNWNKVKIRYCDGASFAGHPESERGSGLFFRGQVIWEAIMDELLSTGLSNAKQALLSGCSAGGLATLIHCDSFRQVLPKEATVKCLADAGFFLDEKDISGNSTMRSFYHDVAQLQGLAKSLHKDCIAKMEPSKCLFPSEIAKNIKTPLFLVHPAYDFWQIRNILVPQGSDPDGHWQRCRLDIRSCNANMIDKLDSYRGSLLKAVNEFQQRKEIGMFIDSCFVHCQTEMEVTWHSPNSPKINDKTIAESVGDWYFDREAVKRIDCSSFSCNPTCHNMDFT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01646 431 PANTHER NOTUM-RELATED 23 426 IPR004963 GO:0016787
Gma18g01646 431 Pfam Pectinacetylesterase 62 409 IPR004963 GO:0016787
Gma18g01646 431 PANTHER PECTIN ACETYLESTERASE 4 23 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01646 Gma-Chr18 46284660 46294846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01646 18 396 Carbohydrate Esterase AT3G09410 58.182 4.30e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01646 K19882 - gmx:100792819 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01646 18 46284660 46294846 Gma18g01646 18 46284660 46294846 ECH