Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01636 ATGGCAGTGCAACCTGAAATTGAGCATCCCAGGAAGGCCTATGGATGGGCAGCTAGGGATACATCTGGTGTTCTCTCCCCTTTTTGGTTCTCTAGAAGGAAAACAGGGGAGAAAGACGTGACATTTAAAGTGTTGTATTGTGGAGTATGCCACTCGGACCTTCACAAGTTGAAAAATGAATGGAGTGATTCCATCTATCCCCTTGTCCCTGGCCGTGAGATTGTTGGAGAAGTGACAGAGGTGGGAAGCAAAGTAGACAAGTTCAAGGTTGGAGACAAAGTAGCTGCGGGATGCTTGGTTGGGTCCTGCCACTCATGCCAAAACTGTGTCAACAATCTTGAGAATTATTGCCAACAAGTGATTCCCACATATGGTGCAAAGTATGTGGATGGCACCATCACATATGGGGGATTCTCAGACTTCATGGTAGCAGATGAGCACTTTGTTGTCAACATTCCAAGTGCCCTACCTCTTGATGCTGCAGCTCCTCTCCTTTGTGCAGGGATCACAGTGTATGGTCCTTTGAGATATTTTGGGCTTGACAAACCTGGCATGCATCTGGGTGTGGTTGGTCTTGGTGGACTAGGCCATCTGGCTGTCAAATTTGCAAAAGCCCTTGGCTTGAAGGTCACTGTCATCAGTACCTCTCCTAAAAAGAAAAATGAAGCCATACAACATCTTGGAGCTGATTTTTTTGTGGTCAGTAGAGACCAAGATCAAATGCAGGCTGCAATGTGCACCTTGGATGGTATAATTGATACTGTTTCTGCAGTCCACCCTCTCATGCCCTTGATTGATCTATTGAAGTCTCATGGGAAACTAGTAGCTGTTGGGGCACCGGAGAAACCTCTGGAATTGCTTCTCCCACCTTTAATTTTGGGGAGAAAAAGTATAGCGGGTAGTTACATTGGAGGAATCAAGGAGACACAAGAAATGATTAATTTCGCTGCTGAACACAATGTTAGACCGGAAATTGAAGTAATTCCTATGGATTATGTGAACACAGCAATGGAGCGTCTCCAGAAAGCCGACGTTAAATATCGATTTGTGATTGACATTGGAAACACATTGAAGCCACACTATTAG 1086 0.4503 MAVQPEIEHPRKAYGWAARDTSGVLSPFWFSRRKTGEKDVTFKVLYCGVCHSDLHKLKNEWSDSIYPLVPGREIVGEVTEVGSKVDKFKVGDKVAAGCLVGSCHSCQNCVNNLENYCQQVIPTYGAKYVDGTITYGGFSDFMVADEHFVVNIPSALPLDAAAPLLCAGITVYGPLRYFGLDKPGMHLGVVGLGGLGHLAVKFAKALGLKVTVISTSPKKKNEAIQHLGADFFVVSRDQDQMQAAMCTLDGIIDTVSAVHPLMPLIDLLKSHGKLVAVGAPEKPLELLLPPLILGRKSIAGSYIGGIKETQEMINFAAEHNVRPEIEVIPMDYVNTAMERLQKADVKYRFVIDIGNTLKPHY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01636 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Gma18g01636 361 SUPERFAMILY GroES-like 21 184 IPR011032 -
Gma18g01636 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Gma18g01636 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 360 - -
Gma18g01636 361 Gene3D - 167 323 - -
Gma18g01636 361 PANTHER ALDEHYDE REDUCTASE 1 360 - -
Gma18g01636 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Gma18g01636 361 Gene3D - 16 353 - -
Gma18g01636 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Gma18g01636 361 CDD CAD1 15 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01636 Gma-Chr18 46082834 46089463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01636 11 360 Monolignol Biosynthesis Gene Families AT4G37990 69.714 1.13e-166 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01636 - K23232 gmx:100812491 704.131