Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01611 ATGTCAGGTGACACACTTCTTATTCAAGAAGCCCTGGGAGAGAAGGTAGGAAAATTCATACAGTGTGTGGCATGTTTTTTAGGAGGTTTAGTCATAGCATTCATCAAGGGTTGGCTTCTAACCCTTGtccttctatcttgtattccacctcttgtcatctctggttccatgatgagctttgcttttgcaaagttggcatcccgtggacaagcagcttattctgaagcagcaactgtagtagagcgcacaattgattcaattcgacaaGGACTTGACACAATTGTTGGCGAGCATGCTACCCAGGTCTTTGGGGGTCAAAAGCAAAGAATTGCCATAGCAAGGGCAATTTTGAAAGATCCAAGAATTCTACAGGTGAACCTTTAA 384 0.2734 MSGDTLLIQEALGEKVGKFIQCVACFLGGLVIAFIKGWLLTLVLLSCIPPLVISGSMMSFAFAKLASRGQAAYSEAATVVERTIDSIRQGLDTIVGEHATQVFGGQKQRIAIARAILKDPRILQVNL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01611 127 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 89 124 - -
Gma18g01611 127 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1 88 - -
Gma18g01611 127 PANTHER - 1 88 - -
Gma18g01611 127 PANTHER - 89 124 - -
Gma18g01611 127 Pfam ABC transporter transmembrane region 1 88 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g01611 127 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 88 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g01611 127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 123 IPR027417 -
Gma18g01611 127 SUPERFAMILY ABC transporter transmembrane region 1 88 IPR036640 GO:0005524|GO:0016021
Gma18g01611 127 Gene3D ABC transporter type 1, transmembrane domain 1 86 IPR036640 GO:0005524|GO:0016021
Gma18g01611 127 Gene3D - 87 123 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01611 Gma-Chr18 44985485 44986479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01611 38 123 Calmodulin-binding Proteins AT2G36910 39.773 5.14e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01611 K05658 - gmx:100798707 169.088